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NECEvent2014_4_7_scaffold_339_24

Organism: NECEvent2014_4_7_Veillonella_parvula-rel_39_396

near complete RP 48 / 55 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(20906..21394)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 323
  • Evalue 1.50e-85
Peptide deformylase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMC1_VEIPT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 323
  • Evalue 1.10e-85
  • rbh
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 323
  • Evalue 3.00e-86
  • rbh

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 489
ATGGCTGTTTTAGATGTTGTGAAAGCAGGTCATCCCGTTTTAAAACAAGTGGCGGAACCTGTAGAACATGTTAATAAAAAACTTAGAGTCCTTATCGATGATATGGCTGAAACTATGTATAAGACTGAAGGAGTTGGTCTTGCAGCACCTCAAGTGGCTGTAGCTAAACGTATTATCGTTGTAGATGACCAATCTGGTAGTGGTCTTATTGCGCTAATTAACCCTGAAATCACTCATGCTGAAGGTTCTCAAGTTGGACCTGAAGGATGCTTAAGTGTGCCAGGATATTTCGGAGATGTGGAACGATTTAATAAAGTCACCGTTAAAGGTATTGATCCACATAATAAGAAGGTAACTATAAAAGCTGAAGGTTTTTTGGCGCGTATTTTCCAACATGAAATTGATCACTTGGAAGGTCATTTGTTTATTGAAAAAGCAACTAACTTACGATTAATTACTGATCATCCAGAGGAGAAAGAAATTGTCTGA
PROTEIN sequence
Length: 163
MAVLDVVKAGHPVLKQVAEPVEHVNKKLRVLIDDMAETMYKTEGVGLAAPQVAVAKRIIVVDDQSGSGLIALINPEITHAEGSQVGPEGCLSVPGYFGDVERFNKVTVKGIDPHNKKVTIKAEGFLARIFQHEIDHLEGHLFIEKATNLRLITDHPEEKEIV*