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NECEvent2014_4_7_scaffold_1168_4

Organism: NECEvent2014_4_7_Veillonella_parvula-rel_39_396

near complete RP 48 / 55 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 3785..5800

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1403949 species="Bacteria; F similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 513.0
  • Bit_score: 980
  • Evalue 9.30e-283
UPI0003D5FE95 related cluster n=1 Tax=unknown RepID=UPI0003D5FE95 similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 513.0
  • Bit_score: 980
  • Evalue 6.60e-283
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 513.0
  • Bit_score: 960
  • Evalue 2.60e-277

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Taxonomy

Veillonella dispar → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2016
ATGAATAATACATTAACAAAACTGCTTTCACAGAACCCATCCTTTGTGGATGGGCTAAACGCATTTCAGCGTAAAGGAAAGTCAGTCATATATGGGCTTAGTGGATCTCAAAAGAGTTTCCTTTTAAACCAAGCTTTTTCTGTAGGTCTTACAAAACCTGTAGTCATCGTAGTCCATGATAAGGATCATAAGGAGATGTGGGAGCGAGATTTAGCTTTCTTTTGGCCTAATGTGCCAGTCCAATCATTTCCTATAACAGATCATGTAGACTTTACAACTGTAGCACGTAGTCTTGAGGACCAAGGTGCACAAATGCGAGCATTAGCATTATTAGCGTGGCAAGAGCCGGCAGTAGTCATTGCCAATGCTGAAGAGGTTACACAATATGTTGTATCCCCTCATTATTTAAAGGGGCAATCGTTGCATTTTGCTTTGAATGATGCAATTGAACGTGATGTAGCCCTTGAACAGCTCGTAACAATTGGATATGAACGCGTAGACCAGGTGGAACAACGTGGTCATTTTGCTGTGCGTTTTCTTGGTCAAAGTGATGCGGATAGCACTCTATTATCTTATGTGAAAGATGGCACTTTGATTTATGATGAGCCAGGTCGTATTCAAGAGGCATTAAAGAAATTCTTAAAAGAAGATCCTACACATCGGAAAAATCATTGTGATTGGAATGAACTACAACGCACTGTAGATGCTACGAATCAAGTGGCTTTCACATTTATGCAACAACGTTCTATTGGTCTCACTGGATTTAACCCTATTGGTATTCAAGGGAAGACGATGACGAGCTTTGAGCGTCAAATTCCCCTATTAACAGATGAAATTAAACAATGGCATCGTTTAAATCATCAAGTGGTACTAGTACTAAATAATCAGCAACGACGAGAAGGTATTGAGCGCGCCCTTGAAGGGGAGAATATTGCATTTATTCATAGTGATACATGGATAGCAAAGCCAAACACTGTCGTTATTTTAAAGGGCTTATTAACAGATGGTTTTGAATTGCCCAATAGCCATCTCGTAGTTGTCGTAGAAGGTAATATTTACGGACAGCAAAAGCGCAAGCTTCGTAATAAGCCTAAAAAGGGCCAAGAAATCAATTATTTTACAGATTTAACGCCTGGTGACTATGTAGTACATAATATGCATGGTATCGGCAAGTATATTGGTCTTAAAACAATTGAGACGGAAGGCATTCACCGCGATTATATTGAGATTGCTTATGCTGGAACGGACAAACTGTTCTTACCAGCTAATAATTTAGATCAACTGCAAAAATATATTGGCAACGAAGGTGATGTGCCACGTATTAATAAGATGGGTGGCCGTGACTGGAGCAAGGTTGTTACAAAGGCAAAAAAATCTATTGATGATTTAGCAGATAAACTCGTTGAGATATATGCACAACGAGAAATCACAGAAGGTTTTGCATTCTTGCCAGACCAACCATGGCAGCAAGAGTTTGAAGATGCATTCCCATATGAGGAAACGGAAGACCAATTACAGGCTACCGCAGAGATTAAAGAATCCATGGAAAGACCTGTTCCTATGGATCGCCTGCTCGCTGGTGATGTAGGTTTTGGTAAAACGGAAGTGGCTATGCGCGCCATTTTCAAGGCTGTTATGAGCGGAAAACAAGTAGCAGTACTTGTACCAACTACGGTTTTAGCACAGCAACATTTCCAAACTTTTTTGAATCGCTTTGCTCCATTTGGGGTGAAAGTAGATGTGCTTAATCGATTCCGAACTACATCAGAGAAAAAACAAATTCTTAAAGGCGTAGAGGATGGATCTATTGATATTCTCATTGGAACCCATTCATTACTTAACAAAAAGGTGGTATTCAAAGACTTAGGAATGCTTGTTGTAGACGAGGAGCAACGTTTTGGGGTAGCACAAAAAGAAAAGTGGAAAGAGTGGGCTAGCAATATCGATGTACTCACCTTGAGTGCTACACCGATTCCGCGGACTTTACATATGTCCACAGGTTTACTTTGTATATAA
PROTEIN sequence
Length: 672
MNNTLTKLLSQNPSFVDGLNAFQRKGKSVIYGLSGSQKSFLLNQAFSVGLTKPVVIVVHDKDHKEMWERDLAFFWPNVPVQSFPITDHVDFTTVARSLEDQGAQMRALALLAWQEPAVVIANAEEVTQYVVSPHYLKGQSLHFALNDAIERDVALEQLVTIGYERVDQVEQRGHFAVRFLGQSDADSTLLSYVKDGTLIYDEPGRIQEALKKFLKEDPTHRKNHCDWNELQRTVDATNQVAFTFMQQRSIGLTGFNPIGIQGKTMTSFERQIPLLTDEIKQWHRLNHQVVLVLNNQQRREGIERALEGENIAFIHSDTWIAKPNTVVILKGLLTDGFELPNSHLVVVVEGNIYGQQKRKLRNKPKKGQEINYFTDLTPGDYVVHNMHGIGKYIGLKTIETEGIHRDYIEIAYAGTDKLFLPANNLDQLQKYIGNEGDVPRINKMGGRDWSKVVTKAKKSIDDLADKLVEIYAQREITEGFAFLPDQPWQQEFEDAFPYEETEDQLQATAEIKESMERPVPMDRLLAGDVGFGKTEVAMRAIFKAVMSGKQVAVLVPTTVLAQQHFQTFLNRFAPFGVKVDVLNRFRTTSEKKQILKGVEDGSIDILIGTHSLLNKKVVFKDLGMLVVDEEQRFGVAQKEKWKEWASNIDVLTLSATPIPRTLHMSTGLLCI*