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NECEvent2014_4_7_scaffold_1168_5

Organism: NECEvent2014_4_7_Veillonella_parvula-rel_39_396

near complete RP 48 / 55 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 5823..6803

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=479436 species="Bacteria; Fi similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 326.0
  • Bit_score: 634
  • Evalue 7.90e-179
Transcription-repair-coupling factor n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BNT3_VEIPT similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 326.0
  • Bit_score: 634
  • Evalue 5.70e-179
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 326.0
  • Bit_score: 634
  • Evalue 1.60e-179

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 981
ATGGGAGAGCTATTAGCGGCTGCCTTGCCTGATTTACGCTATGCTATCGCTCATGGACAGATGACAGGTCGTCAAATTGAGGAGATTATGACCGATTTCTATGAAGGTCATTATGATGTGCTCTTGTCCACGAGTATCATTGAAACCGGCTTAGATATTCCTAACGCCAATACTATCATTATTTATGATGCGGATCGTTTAGGTTTATCTCAGCTATACCAAATGCGAGGGCGTGTAGGCCGTTCTCGTAGACGTGCTTATGCATACTTTATGTATCGGCCAGATAAAATACTTTCAGAGGCAGCTGAAAAGCGTTTGAAAGCCATAGAGGAGTTCACTGAGCTCGGCGCAGGATTTAAGTTAGCCATGCGAGATTTAGAGATTCGCGGTGCCGGTAATCTATTAGGTTCACAGCAACATGGTAATATCGCATCTGTCGGCTTTGGCATGTACGTGAGTATGTTAGAAGAGGCGATTGCAAAGGCTCAAAATAAAGAAGTTGAGCGAGATGTATCCATTGATCCAGCTATCGATTTAGAGGTAGATGCGTTTATTGACGATGCGTATATCAAAGATAGTGCTCGTAAGATTTCTGTATACCAACGATTGTTACATATTAAATCTAAAGAGCAACTCGACGATATGACGGATGAGCTCATTGATCGCTTCGGTACACCAACCGATCCAGTAGACCGTTTGTTGCGCATTGCTCAAATTAAGGAGCAAGCACGTCTACTGGGCATTAAGAGTATCGTCCGTAGAGATAAGCAACTCACTATCCATTGGCATGACGATTCTAAAATGGCCGATTGGGATATGGGGGCTGTACCAGAAGATTTATGGAAAAAAATGAAGTTTATGGATACCAAACCAGCCACATTATATGTAAGCCTTAATGGTATGAAAGGTTCTATTTTGACCATTACGGAAGCGGTGATAAAGGCTCTTAGCCACAAGTCACCGACTAAGGAGGGCCTATGA
PROTEIN sequence
Length: 327
MGELLAAALPDLRYAIAHGQMTGRQIEEIMTDFYEGHYDVLLSTSIIETGLDIPNANTIIIYDADRLGLSQLYQMRGRVGRSRRRAYAYFMYRPDKILSEAAEKRLKAIEEFTELGAGFKLAMRDLEIRGAGNLLGSQQHGNIASVGFGMYVSMLEEAIAKAQNKEVERDVSIDPAIDLEVDAFIDDAYIKDSARKISVYQRLLHIKSKEQLDDMTDELIDRFGTPTDPVDRLLRIAQIKEQARLLGIKSIVRRDKQLTIHWHDDSKMADWDMGAVPEDLWKKMKFMDTKPATLYVSLNGMKGSILTITEAVIKALSHKSPTKEGL*