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NECEvent2014_4_7_scaffold_24

Alias: 174_007_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_24_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..1722
DNA (1722bp) protein (574aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KH14_CLOBU rbh
Histidine kinase {ECO:0000313|EMBL:KHD16388.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
multi-sensor signal transduction histidine kinase
NECEvent2014_4_7_scaffold_24_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1830..3839)
DNA (2010bp) protein (670aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z778_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35565.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative methyl-accepting chemotaxis protein
NECEvent2014_4_7_scaffold_24_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4074..6263)
DNA (2190bp) protein (730aa)
agaR1; alpha-galactosidase 1 (EC:3.2.1.22)
UPI0003D69165 related cluster n=1 Tax=unknown RepID=UPI0003D69165 rbh
Alpha-galactosidase AgaN {ECO:0000313|EMBL:ETI88243.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_4_7_scaffold_24_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6480..8234)
DNA (1755bp) protein (585aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGS2_CLOBU rbh
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:KJZ86065.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
NECEvent2014_4_7_scaffold_24_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8515..9663)
DNA (1149bp) protein (383aa)
Cyclically-permuted mutarotase family protein n=2 Tax=Clostridium butyricum RepID=M8KH09_CLOBU rbh
Cyclically-permuted mutarotase {ECO:0000313|EMBL:ENZ35562.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.
lipoprotein
NECEvent2014_4_7_scaffold_24_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9781..10722)
DNA (942bp) protein (314aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.2)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6Q9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35561.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_7_scaffold_24_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10726..11424)
DNA (699bp) protein (233aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=997
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z772_CLOBU rbh
NECEvent2014_4_7_scaffold_24_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11544..12497)
DNA (954bp) protein (318aa)
deacetylase (EC:3.1.1.41)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AS32_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35559.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_7_scaffold_24_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12499..13464)
DNA (966bp) protein (322aa)
Xylan esterase 1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8S4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35558.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Acetyl xylan esterase
NECEvent2014_4_7_scaffold_24_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13476..15095)
DNA (1620bp) protein (540aa)
Pyridine nucleotide-disulphide oxidoreductase n=2 Tax=Clostridium butyricum RepID=B1QZ43_CLOBU rbh
Pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EEP52636.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium b
pyridine nucleotide-disulfide oxidoreductase
NECEvent2014_4_7_scaffold_24_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15085..16014)
DNA (930bp) protein (310aa)
N-acetylneuraminate lyase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6Q3_CLOBU rbh
N-acetylneuraminate lyase {ECO:0000313|EMBL:ENZ35556.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
dihydrodipicolinate synthase/N-acetylneuraminate lyase
NECEvent2014_4_7_scaffold_24_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16007..17047)
DNA (1041bp) protein (347aa)
Oligopeptide transport ATP-binding protein AppF n=4 Tax=Clostridium butyricum RepID=B1QZ41_CLOBU rbh
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:KJZ86073.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
oligopeptide/dipeptide ABC transporter ATP-binding protein
NECEvent2014_4_7_scaffold_24_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17034..18044)
DNA (1011bp) protein (337aa)
Dipeptide transport ATP-binding protein DppD n=2 Tax=Clostridium butyricum RepID=M8JM79_CLOBU rbh
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:KJZ86075.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
oligopeptide/dipeptide ABC transporter ATP-binding protein
NECEvent2014_4_7_scaffold_24_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18056..18985)
DNA (930bp) protein (310aa)
Oligopeptide transport system permease protein AppC n=4 Tax=Clostridium butyricum RepID=B1QZ39_CLOBU rbh
Peptide/nickel ABC transporter permease {ECO:0000313|EMBL:ENZ35553.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
dipeptide/oligopeptide/nickel ABC transporter permease
NECEvent2014_4_7_scaffold_24_15
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18997..19956)
DNA (960bp) protein (320aa)
Oligopeptide transport system permease protein AppB n=4 Tax=Clostridium butyricum RepID=B1QZ38_CLOBU rbh
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:KJZ89514.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
dipeptide/oligopeptide/nickel ABC transporter permease
NECEvent2014_4_7_scaffold_24_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20031..21671)
DNA (1641bp) protein (547aa)
Putative oligopeptide ABC transporter, oligopeptide-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD21_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86052.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
extracellular solute-binding protein, family 5
NECEvent2014_4_7_scaffold_24_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22189..23025)
DNA (837bp) protein (279aa)
Phosphosugar-binding transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=M8JNH2_CLOBU rbh
Sialic acid utilization regulator, RpiR family {ECO:0000313|EMBL:KJZ86033.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
RpiR family transcriptional regulator
NECEvent2014_4_7_scaffold_24_18
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23349..25403)
DNA (2055bp) protein (685aa)
Uncharacterised protein {ECO:0000313|EMBL:CEQ22175.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
NECEvent2014_4_7_scaffold_24_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25578..26411)
DNA (834bp) protein (278aa)
UPI0003D65245 related cluster n=1 Tax=unknown RepID=UPI0003D65245 rbh
Prephenate dehydrogenase {ECO:0000313|EMBL:ETI88238.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
prephenate dehydrogenase
NECEvent2014_4_7_scaffold_24_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26493..27506)
DNA (1014bp) protein (338aa)
UPI0003D67ECF related cluster n=1 Tax=unknown RepID=UPI0003D67ECF rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:ETI88237.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bu
3-deoxy-7-phosphoheptulonate synthase
NECEvent2014_4_7_scaffold_24_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27696..28460)
DNA (765bp) protein (255aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214,
aroD; 3-dehydroquinate dehydratase AroD (EC:4.2.1.10) rbh
3-dehydroquinate dehydratase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU24_CLOBU rbh
NECEvent2014_4_7_scaffold_24_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28581..29600)
DNA (1020bp) protein (340aa)
DctP family TRAP transporter solute receptor n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6P5_CLOBU rbh
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:ENZ35546.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bu
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
NECEvent2014_4_7_scaffold_24_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29611..30906)
DNA (1296bp) protein (432aa)
Trap dicarboxylate transporter, dctm subunit n=3 Tax=Clostridium butyricum RepID=C4ILX6_CLOBU rbh
TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:KJZ86057.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
TRAP transporter, DctM subunit
NECEvent2014_4_7_scaffold_24_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30911..31390)
DNA (480bp) protein (160aa)
C4-dicarboxylate transport system n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8Q0_CLOBU rbh
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD16366.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
TRAP-type C4-dicarboxylate transport system, small permease component
NECEvent2014_4_7_scaffold_24_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31595..32467)
DNA (873bp) protein (291aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|SAAS:SAAS00228653}; EC=1.1.1.25 {ECO:0000256|SAAS:SAAS00216361};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
Shikimate dehydrogenase n=4 Tax=Clostridium butyricum RepID=B1QZ28_CLOBU rbh
hypothetical protein
NECEvent2014_4_7_scaffold_24_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32531..33739)
DNA (1209bp) protein (403aa)
Inner membrane transport protein YdiN n=2 Tax=Clostridium butyricum RepID=M8JD01_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86037.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
inner membrane transport protein YdiN rbh
NECEvent2014_4_7_scaffold_24_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34041..35075
DNA (1035bp) protein (345aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z6N9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86001.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative transcription regulator, AraC family
NECEvent2014_4_7_scaffold_24_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35178..37181)
DNA (2004bp) protein (668aa)
NADH oxidase (EC:1.-.-.-)
NADH oxidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JM58_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86031.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_7_scaffold_24_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37432..38319
DNA (888bp) protein (296aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AS06_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86002.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
yybE1; HTH-type transcriptional regulator YybE
NECEvent2014_4_7_scaffold_24_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38460..38975)
DNA (516bp) protein (172aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia
aroK; shikimate kinase AroK (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KGW5_CLOBU rbh
Displaying items 1-30 of 68 in total

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