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NECEvent2014_4_7_scaffold_73

Alias: 174_007_scaffold_73

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_73_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

283..1023
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QYR8_CLOBU rbh
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_7_scaffold_73_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1036..1734
DNA (699bp) protein (233aa)
Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=2 Tax=Clostridium butyricum RepID=B1QYR7_CLOBU rbh
Two-component system response regulator {ECO:0000313|EMBL:ENZ35950.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
two component transcriptional regulator
NECEvent2014_4_7_scaffold_73_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1739..3427
DNA (1689bp) protein (563aa)
resE3; sensor histidine kinase ResE (EC:2.7.13.3)
Sensor histidine kinase n=2 Tax=Clostridium butyricum RepID=M8KCU7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83039.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_7_scaffold_73_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3933..4865
DNA (933bp) protein (311aa)
UPI00039D3904 related cluster n=1 Tax=unknown RepID=UPI00039D3904 rbh
Phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD16801.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
pstS; phosphate-binding protein PstS 1
NECEvent2014_4_7_scaffold_73_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4982..5872
DNA (891bp) protein (297aa)
Phosphate ABC transporter, permease protein PstC n=2 Tax=Clostridium butyricum RepID=M8JJC2_CLOBU rbh
Serine/threonine protein kinase PrkC, regulator of stationary phase {ECO:0000313|EMBL:KJZ84574.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
phosphate ABC transporter, inner membrane subunit PstC
NECEvent2014_4_7_scaffold_73_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5872..6756
DNA (885bp) protein (295aa)
Phosphate ABC transporter, permease protein PstA n=4 Tax=Clostridium butyricum RepID=B1QYR3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84573.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
yqgI; ABC transporter permease protein YqgI
NECEvent2014_4_7_scaffold_73_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6766..7515
DNA (750bp) protein (250aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
pstB1; phosphate import ATP-binding protein PstB (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8K4L2_CLOBU rbh
NECEvent2014_4_7_scaffold_73_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7537..8199
DNA (663bp) protein (221aa)
Phosphate-specific transport system accessory protein PhoU n=4 Tax=Clostridium butyricum RepID=B1QYR1_CLOBU rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
phosphate uptake regulator PhoU
NECEvent2014_4_7_scaffold_73_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8381..8566
DNA (186bp) protein (62aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1523154 species="Bacteria; Firmic
Polyphosphate kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JJB7_CLOBU
NECEvent2014_4_7_scaffold_73_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8798..10138
DNA (1341bp) protein (447aa)
Fe-S oxidoreductase n=2 Tax=Clostridium butyricum RepID=M8JHZ1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ82979.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NifB/MoaA family Fe-S oxidoreductase
NECEvent2014_4_7_scaffold_73_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10138..11454
DNA (1317bp) protein (439aa)
GTPase Der n=4 Tax=Clostridium butyricum RepID=B1QYI8_CLOBU rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostri
der; GTPase Der
NECEvent2014_4_7_scaffold_73_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11459..12451
DNA (993bp) protein (331aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=4 Tax=Clostridium butyricum RepID=B1QYI7_CLOBU rbh
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
NECEvent2014_4_7_scaffold_73_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12694..14187
DNA (1494bp) protein (498aa)
UPI0003D5DC22 related cluster n=1 Tax=unknown RepID=UPI0003D5DC22 rbh
Polyferredoxin {ECO:0000313|EMBL:KJZ84578.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
spoIVA; stage IV sporulation protein A
NECEvent2014_4_7_scaffold_73_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14375..14812
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JJB2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83441.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
NECEvent2014_4_7_scaffold_73_15
unknown

Not on your lists

14955..15065
DNA (111bp) protein (37aa)

This feature has no annotations

NECEvent2014_4_7_scaffold_73_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15040..16023
DNA (984bp) protein (328aa)
L-asparaginase {ECO:0000313|EMBL:EEP54406.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EEP54406.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
ansA; type II L-asparaginase (EC:3.5.1.1)
L-asparaginase n=2 Tax=Clostridium butyricum RepID=C4IJI5_CLOBU rbh
NECEvent2014_4_7_scaffold_73_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16438..17817
DNA (1380bp) protein (460aa)
Inner membrane protein YicO n=4 Tax=Clostridium butyricum RepID=C4IJI4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35964.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
permease family protein
NECEvent2014_4_7_scaffold_73_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18073..18975
DNA (903bp) protein (301aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R2X8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ82969.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_73_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18991..19260
DNA (270bp) protein (90aa)
UPF0296 protein CBY_0536 n=4 Tax=Clostridium butyricum RepID=B1R2X7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD16786.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_4_7_scaffold_73_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19260..19898
DNA (639bp) protein (213aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
gmk; guanylate kinase Gmk (EC:2.7.4.8)
Guanylate kinase n=4 Tax=Clostridium butyricum RepID=B1R2X6_CLOBU rbh
NECEvent2014_4_7_scaffold_73_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19879..20100
DNA (222bp) protein (74aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=4 Tax=Clostridium butyricum RepID=B1R2X5_CLOBU
NECEvent2014_4_7_scaffold_73_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20102..21286
DNA (1185bp) protein (395aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AT74_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ82951.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
NECEvent2014_4_7_scaffold_73_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21322..23571
DNA (2250bp) protein (750aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1523154 species="Bacteria;
priA; primosomal protein N' (EC:3.6.4.-)
Primosomal protein N n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8A6_CLOBU rbh
NECEvent2014_4_7_scaffold_73_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23584..24024
DNA (441bp) protein (147aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase n=4 Tax=Clostridium butyricum RepID=B1R2X2_CLOBU
def; peptide deformylase
NECEvent2014_4_7_scaffold_73_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24224..25150
DNA (927bp) protein (309aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1523154 species="
fmt; methionyl-tRNA formyltransferase Fmt (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JJA1_CLOBU rbh
NECEvent2014_4_7_scaffold_73_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25357..26673
DNA (1317bp) protein (439aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
rsmB; ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHX8_CLOBU rbh
NECEvent2014_4_7_scaffold_73_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26688..27731
DNA (1044bp) protein (348aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
rlmN: dual-specificity RNA methyltransferase RlmN (EC:2.1.1.- 2.1.1.192)
Probable dual-specificity RNA methyltransferase RlmN n=4 Tax=Clostridium butyricum RepID=B1R2W9_CLOBU rbh
NECEvent2014_4_7_scaffold_73_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27733..28452
DNA (720bp) protein (240aa)
protein phosphatase PrpC (EC:3.1.3.16)
Protein phosphatase PrpC n=2 Tax=Clostridium butyricum RepID=M8KCR6_CLOBU rbh
Protein serine/threonine phosphatase PrpC, regulation of stationary phase {ECO:0000313|EMBL:KJZ83016.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
NECEvent2014_4_7_scaffold_73_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28455..30467
DNA (2013bp) protein (671aa)
Serine/threonine-protein kinase PrkC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J8W8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35976.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
protein kinase
NECEvent2014_4_7_scaffold_73_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30587..31459
DNA (873bp) protein (291aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost
rsgA; putative ribosome biogenesis GTPase RsgA (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=2 Tax=Clostridium butyricum RepID=M8JJ98_CLOBU rbh
Displaying items 1-30 of 51 in total

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