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NECEvent2014_4_7_scaffold_136

Alias: 174_007_scaffold_136

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_136_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

77..232
DNA (156bp) protein (52aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QTU2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53947.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_7_scaffold_136_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

497..1717
DNA (1221bp) protein (407aa)
Peptidoglycan N-acetylglucosamine deacetylase {ECO:0000313|EMBL:KJZ97031.1}; EC=3.5.1.- {ECO:0000313|EMBL:KJZ97031.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
DNA repair exonuclease n=2 Tax=Clostridium butyricum RepID=B1QTU1_CLOBU rbh
sbcD; nuclease SbcCD subunit D
NECEvent2014_4_7_scaffold_136_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1704..5195
DNA (3492bp) protein (1164aa)
Exonuclease SbcCD, C subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHB8_CLOBU rbh
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:EEP54490.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str.
sbcC; nuclease SbcCD subunit C
NECEvent2014_4_7_scaffold_136_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5309..5440
DNA (132bp) protein (44aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI91095.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_4_7_scaffold_136_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5496..6068
DNA (573bp) protein (191aa)
UPI0003D66308 related cluster n=1 Tax=unknown RepID=UPI0003D66308 rbh
50S ribosomal protein L25 {ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|SAAS:SAAS00023360}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
rplY1; 50S ribosomal protein L25
NECEvent2014_4_7_scaffold_136_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6234..6821
DNA (588bp) protein (196aa)
UPI0003D6141B related cluster n=1 Tax=unknown RepID=UPI0003D6141B rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1492 spec
rplY2; 50S ribosomal protein L25
NECEvent2014_4_7_scaffold_136_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7227..8972
DNA (1746bp) protein (582aa)
pgcA1; phosphoglucomutase PgcA (EC:5.4.2.2)
UPI0003D5E8BF related cluster n=1 Tax=unknown RepID=UPI0003D5E8BF rbh
Phosphomannomutase {ECO:0000313|EMBL:ETI91098.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_4_7_scaffold_136_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9216..10313
DNA (1098bp) protein (366aa)
TPR domain protein n=4 Tax=Clostridium butyricum RepID=B1QTT6_CLOBU rbh
TPR repeats containing protein {ECO:0000313|EMBL:KJZ83167.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
tetratricopeptide TPR_2 repeat protein
NECEvent2014_4_7_scaffold_136_9
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10387..11127
DNA (741bp) protein (247aa)
tagA; putative N-acetylmannosaminyltransferase TagA (EC:2.4.1.187)
UPI0003D630CC related cluster n=1 Tax=unknown RepID=UPI0003D630CC rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88855.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_4_7_scaffold_136_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11140..12672
DNA (1533bp) protein (511aa)
Integral membrane protein MviN n=4 Tax=Clostridium butyricum RepID=B1QTT4_CLOBU rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C
integral membrane protein MviN
NECEvent2014_4_7_scaffold_136_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12736..14034
DNA (1299bp) protein (433aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QTT3_CLOBU rbh
TPR/glycosyl transferase domain protein {ECO:0000313|EMBL:KJZ88851.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
glycosyl transferases group 1
NECEvent2014_4_7_scaffold_136_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14039..15196
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUX8_CLOBU rbh
Putative teichuronic acid biosynthesis glycosyl transferase TuaC {ECO:0000313|EMBL:KJZ83166.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
group 1 glycosyl transferase
NECEvent2014_4_7_scaffold_136_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15186..16412
DNA (1227bp) protein (409aa)
O-antigen polymerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JIR3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83164.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
O-antigen polymerase
NECEvent2014_4_7_scaffold_136_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16446..17090
DNA (645bp) protein (215aa)
Para-aminobenzoate synthase, aminase component {ECO:0000313|EMBL:KJZ97030.1}; EC=2.6.1.85 {ECO:0000313|EMBL:KJZ97030.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
Formiminotransferase-cyclodeaminase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHA7_CLOBU rbh
formiminotransferase-cyclodeaminase
NECEvent2014_4_7_scaffold_136_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17151..17291)
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8K3Z8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83120.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_136_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17458..17961
DNA (504bp) protein (168aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTS9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35826.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_7_scaffold_136_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18012..18902)
DNA (891bp) protein (297aa)
30.6 kDa protein in fumA 3'region (EC:3.5.1.-)
Delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUY3_CLOBU rbh
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:ENZ35827.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyri
NECEvent2014_4_7_scaffold_136_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19133..20230
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=2 Tax=Clostridium butyricum RepID=M8JIQ7_CLOBU rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
ychF; GTP-dependent nucleic acid-binding protein EngD
NECEvent2014_4_7_scaffold_136_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20485..22218
DNA (1734bp) protein (578aa)
TPR repeat protein n=2 Tax=Clostridium butyricum RepID=M8JHA2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35829.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
tetratricopeptide TPR_2 repeat protein
NECEvent2014_4_7_scaffold_136_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22350..23492
DNA (1143bp) protein (381aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QTS5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP53829.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_7_scaffold_136_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23583..24446
DNA (864bp) protein (288aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KC64_CLOBU rbh
undecaprenyl pyrophosphate phosphatase
NECEvent2014_4_7_scaffold_136_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24781..25956
DNA (1176bp) protein (392aa)
pfkA1; 6-phosphofructokinase 2 (EC:2.7.1.11)
UPI0003D647F4 related cluster n=1 Tax=unknown RepID=UPI0003D647F4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83138.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_7_scaffold_136_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26049..26828
DNA (780bp) protein (260aa)
Beta-lactamase n=5 Tax=Clostridium butyricum RepID=B1QTS2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83141.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
beta-lactamase, putative
NECEvent2014_4_7_scaffold_136_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27203..28129
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1523154 species="Ba
pyrB; aspartate carbamoyltransferase PyrB (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH98_CLOBU rbh
NECEvent2014_4_7_scaffold_136_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28130..28552
DNA (423bp) protein (141aa)
Aspartate carbamoyltransferase regulatory chain n=4 Tax=Clostridium butyricum RepID=B1QTS0_CLOBU
Aspartate carbamoyltransferase regulatory chain (PyrI) {ECO:0000313|EMBL:KJZ83185.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
aspartate carbamoyltransferase regulatory subunit
NECEvent2014_4_7_scaffold_136_26
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28703..29902
DNA (1200bp) protein (400aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS0008
pyrC; dihydroorotase PyrC (EC:3.5.2.3)
Dihydroorotase n=2 Tax=Clostridium butyricum RepID=M8KC59_CLOBU rbh
NECEvent2014_4_7_scaffold_136_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29944..30816
DNA (873bp) protein (291aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase
pyrF; orotidine 5'-phosphate decarboxylase PyrF (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=4 Tax=Clostridium butyricum RepID=B1QTR8_CLOBU rbh
NECEvent2014_4_7_scaffold_136_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31009..31752
DNA (744bp) protein (248aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=2 Tax=Clostridium butyricum RepID=M8JIP9_CLOBU rbh
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=15231
pyrK; dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit
NECEvent2014_4_7_scaffold_136_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31772..32668
DNA (897bp) protein (299aa)
pyrD; dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit (EC:1.3.1.14)
Dihydroorotate dehydrogenase n=4 Tax=Clostridium butyricum RepID=B1QTR6_CLOBU rbh
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
NECEvent2014_4_7_scaffold_136_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32702..33376
DNA (675bp) protein (225aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
pyrE; orotate phosphoribosyltransferase PyrE (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTR5_CLOBU rbh
Displaying items 1-30 of 33 in total

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