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NECEvent2014_4_7_scaffold_160

Alias: 174_007_scaffold_160

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_160_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(74..355)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQI3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83688.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_7_scaffold_160_2
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(513..1472)
DNA (960bp) protein (320aa)
K+-dependent Na+/Ca+ exchanger protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KFG6_CLOBU rbh
Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter {ECO:0000313|EMBL:KJZ96758.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
putative K+-dependent Na+/Ca+ exchanger-like protein
NECEvent2014_4_7_scaffold_160_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1895..3451
DNA (1557bp) protein (519aa)
yfmM; ABC transporter ATP-binding protein YfmM (EC:3.6.3.-)
ATPase component of ABC transporter n=4 Tax=Clostridium butyricum RepID=B1QTJ5_CLOBU rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ34339.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 6
NECEvent2014_4_7_scaffold_160_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3522..3719)
DNA (198bp) protein (66aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QTJ4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83695.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_160_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3756..4532)
DNA (777bp) protein (259aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
ytzG2; RNA pseudouridine synthase YtzG (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z360_CLOBU rbh
NECEvent2014_4_7_scaffold_160_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4675..6702)
DNA (2028bp) protein (676aa)
UPI0003A78026 related cluster n=1 Tax=unknown RepID=UPI0003A78026 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ95702.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
methyl-accepting chemotaxis protein
NECEvent2014_4_7_scaffold_160_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7133..7747
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQI6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83616.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_160_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7839..7985)
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KFG1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34343.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_7_scaffold_160_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8217..8414
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QTJ0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83623.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_7_scaffold_160_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8636..9856
DNA (1221bp) protein (407aa)
Threonine ammonia-lyase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z3U7_CLOBU rbh
Threonine ammonia-lyase {ECO:0000313|EMBL:ENZ34345.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
threonine dehydratase
NECEvent2014_4_7_scaffold_160_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9924..10103)
DNA (180bp) protein (60aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTI8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83699.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_160_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10175..10831)
DNA (657bp) protein (219aa)
N-formylglutamate deformylase {ECO:0000313|EMBL:KJZ83665.1}; EC=3.5.1.68 {ECO:0000313|EMBL:KJZ83665.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
phosphorylated carbohydrates phosphatase (EC:3.1.3.-)
Phosphorylated carbohydrates phosphatase n=2 Tax=Clostridium butyricum RepID=M8K766_CLOBU rbh
NECEvent2014_4_7_scaffold_160_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11004..12173)
DNA (1170bp) protein (390aa)
Permease n=3 Tax=Clostridium butyricum RepID=B1QTI6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34348.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_7_scaffold_160_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12477..13094)
DNA (618bp) protein (206aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|
udk; uridine kinase Udk (EC:2.7.1.48)
Uridine kinase n=4 Tax=Clostridium butyricum RepID=B1QTI5_CLOBU rbh
NECEvent2014_4_7_scaffold_160_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13422..14216)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z3V1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83659.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_160_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14575..15423)
DNA (849bp) protein (283aa)
DegV family EDD domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z368_CLOBU rbh
DegV family protein {ECO:0000313|EMBL:KJZ83658.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DegV family protein
NECEvent2014_4_7_scaffold_160_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15568..15720
DNA (153bp) protein (51aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTI2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83613.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_160_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15854..16009)
DNA (156bp) protein (52aa)
Zinc-binding domain protein n=2 Tax=Clostridium RepID=U5MSK6_CLOSA
zinc-binding domain protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ34353.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_7_scaffold_160_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16302..18020)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JLX0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83628.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_160_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18464..18817)
DNA (354bp) protein (118aa)
Zinc finger protein n=4 Tax=Clostridium butyricum RepID=B1QTH9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34355.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_7_scaffold_160_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18915..20165)
DNA (1251bp) protein (417aa)
Sarcosine oxidase alpha subunit {ECO:0000313|EMBL:KJZ83646.1}; EC=1.5.3.1 {ECO:0000313|EMBL:KJZ83646.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Clostridium butyricum RepID=M8K756_CLOBU rbh
thioredoxin reductase
NECEvent2014_4_7_scaffold_160_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20403..21833)
DNA (1431bp) protein (477aa)
Glycerol-3-phosphate dehydrogenase, glpa n=4 Tax=Clostridium butyricum RepID=B1QTH7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34357.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
FAD dependent oxidoreductase
NECEvent2014_4_7_scaffold_160_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22016..23515)
DNA (1500bp) protein (500aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP
glpK1; glycerol kinase GlpK (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AD78_CLOBU rbh
NECEvent2014_4_7_scaffold_160_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23590..24294)
DNA (705bp) protein (235aa)
Glycerol uptake facilitator protein n=2 Tax=Clostridium butyricum RepID=C4IKF0_CLOBU rbh
Glycerol uptake facilitator protein {ECO:0000313|EMBL:EEP54882.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E
glpF; putative glycerol uptake facilitator protein GlpF
NECEvent2014_4_7_scaffold_160_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24436..25098)
DNA (663bp) protein (221aa)
UPI0003D69BE6 related cluster n=1 Tax=unknown RepID=UPI0003D69BE6 rbh
Glycerol-3-phosphate responsive antiterminator {ECO:0000313|EMBL:ETI90252.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
glycerol-3-phosphate responsive antiterminator
NECEvent2014_4_7_scaffold_160_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25240..26802)
DNA (1563bp) protein (521aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
ydiF3; acetate CoA-transferase YdiF (EC:2.8.3.8)
Acetate CoA-transferase YdiF n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z377_CLOBU rbh
NECEvent2014_4_7_scaffold_160_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26842..27459)
DNA (618bp) protein (206aa)
Sugar phosphate aldolase n=4 Tax=Clostridium butyricum RepID=B1R2W3_CLOBU rbh
Ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:KJZ83705.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
L-ribulose-5-phosphate 4-epimerase
NECEvent2014_4_7_scaffold_160_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27786..28667)
DNA (882bp) protein (294aa)
UPI0003D6966E related cluster n=1 Tax=unknown RepID=UPI0003D6966E rbh
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ETI90255.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bu
glycerophosphoryl diester phosphodiesterase
NECEvent2014_4_7_scaffold_160_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28691..30565)
DNA (1875bp) protein (625aa)
UPI0003D5AE9B related cluster n=2 Tax=unknown RepID=UPI0003D5AE9B rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ETI90256.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
methyl-accepting chemotaxis sensory transducer
NECEvent2014_4_7_scaffold_160_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30795..31607)
DNA (813bp) protein (271aa)
ykrA1; putative phosphatase YkrA (EC:3.1.3.-)
Cof-like hydrolase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z3W0_CLOBU rbh
Hydrolase (HAD superfamily) in cluster with DUF1447 {ECO:0000313|EMBL:KJZ83664.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
Displaying items 1-30 of 34 in total

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