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NECEvent2014_4_7_scaffold_229

Alias: 174_007_scaffold_229

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_229_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(196..1497)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YZ57_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32730.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
histidine kinase
NECEvent2014_4_7_scaffold_229_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1494..2174)
DNA (681bp) protein (227aa)
Regulatory protein VanR n=3 Tax=Clostridium butyricum RepID=B1R2A9_CLOBU rbh
Regulatory protein VanR {ECO:0000313|EMBL:EEP56288.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
two component transcriptional regulator
NECEvent2014_4_7_scaffold_229_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2167..2724)
DNA (558bp) protein (186aa)
Ribosomal RNA adenine dimethylase phospholipid N-methyltransferase n=4 Tax=Clostridium butyricum RepID=B1R2A8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ92216.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_7_scaffold_229_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2950..4269)
DNA (1320bp) protein (440aa)
Xanthine permease n=3 Tax=Clostridium butyricum RepID=M8JZR5_CLOBU rbh
Xanthine permease {ECO:0000313|EMBL:ENZ32726.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
uracil-xanthine permease rbh
NECEvent2014_4_7_scaffold_229_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4663..5583)
DNA (921bp) protein (307aa)
Oxidoreductase, aldo/keto reductase family n=2 Tax=Clostridium butyricum RepID=C4IBH3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ92215.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
oxidoreductase
NECEvent2014_4_7_scaffold_229_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5789..6634)
DNA (846bp) protein (282aa)
Transcriptional regulator n=3 Tax=Clostridium butyricum RepID=B1QW74_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32724.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
RpiR family transcriptional regulator
NECEvent2014_4_7_scaffold_229_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6664..7746)
DNA (1083bp) protein (361aa)
Outer surface protein n=3 Tax=Clostridium butyricum RepID=B1QW75_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85584.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_229_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7762..8970)
DNA (1209bp) protein (403aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
anmK; anhydro-N-acetylmuramic acid kinase (EC:2.7.1.-)
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7U2_CLOBU rbh
NECEvent2014_4_7_scaffold_229_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8945..9841)
DNA (897bp) protein (299aa)
ATPase family protein n=4 Tax=Clostridium butyricum RepID=B1QW77_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85611.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
BadF/BadG/BcrA/BcrD type ATPase
NECEvent2014_4_7_scaffold_229_10
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10013..10981)
DNA (969bp) protein (323aa)
Tat pathway signal sequence n=1 Tax=Prevotella sp. CAG:279 RepID=R7HMF1_9BACT
Tat pathway signal sequence {ECO:0000313|EMBL:CDE40824.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prev
Tat (twin-arginine translocation) pathway signal sequence
NECEvent2014_4_7_scaffold_229_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11086..11382)
DNA (297bp) protein (99aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QW78_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85601.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_229_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11453..11758)
DNA (306bp) protein (102aa)
Lichenan-specific phosphotransferase enzyme iia component {ECO:0000313|EMBL:EEP56108.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEP56108.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiale
Lichenan-specific phosphotransferase enzyme iia component n=2 Tax=Clostridium butyricum RepID=B1QW79_CLOBU
PTS system lactose/cellobiose-specific transporter subunit IIA
NECEvent2014_4_7_scaffold_229_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11779..13089)
DNA (1311bp) protein (437aa)
6-phospho-beta-glucosidase (Cellobiose-6-phosphatehydrolase) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J450_CLOBU rbh
Diacetylchitobiose-6-phosphate hydrolase {ECO:0000313|EMBL:KHD14443.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricu
glycoside hydrolase
NECEvent2014_4_7_scaffold_229_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13170..14423)
DNA (1254bp) protein (418aa)
Lichenan permease iic component n=2 Tax=Clostridium butyricum RepID=B1QW81_CLOBU rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
PTS system lactose/cellobiose family IIC subunit
NECEvent2014_4_7_scaffold_229_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14451..14846)
DNA (396bp) protein (132aa)
PTS system, diacetylchitobiose-specific IIB component n=4 Tax=Clostridium butyricum RepID=B1QW82_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85609.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phosphotransferase system, lactose/cellobiose-specific IIB subunit
NECEvent2014_4_7_scaffold_229_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14809..15714)
DNA (906bp) protein (302aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
murQ; N-acetylmuramic acid-6-phosphate etherase (EC:4.2.-.-)
N-acetylmuramic acid 6-phosphate etherase n=4 Tax=Clostridium butyricum RepID=B1QW83_CLOBU rbh
NECEvent2014_4_7_scaffold_229_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16279..16704)
DNA (426bp) protein (142aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEG7_CLOBU
Acetyltransferase {ECO:0000313|EMBL:KJZ85599.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
GCN5-related N-acetyltransferase
NECEvent2014_4_7_scaffold_229_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16902..17768)
DNA (867bp) protein (289aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J454_CLOBU rbh
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ETI88375.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DOR
NAD-dependent epimerase/dehydratase
NECEvent2014_4_7_scaffold_229_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17992..18816)
DNA (825bp) protein (275aa)
Transcriptional regulator n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7U9_CLOBU rbh
Transcriptional regulator, MerR family {ECO:0000313|EMBL:KJZ85593.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
transcriptional activator ligand binding domain-containing protein
NECEvent2014_4_7_scaffold_229_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19038..19823)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YZ41_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32710.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
iron-sulfur cluster-binding protein, rieske family
NECEvent2014_4_7_scaffold_229_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20229..20729)
DNA (501bp) protein (167aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium butyricum RepID=M8JD51_CLOBU rbh
PhnO protein {ECO:0000313|EMBL:KJZ85600.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
N-acetyltransferase GCN5
NECEvent2014_4_7_scaffold_229_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20883..21869)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A8J0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32708.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Predicted permeases
NECEvent2014_4_7_scaffold_229_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22004..22288)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J458_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32707.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_7_scaffold_229_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22367..22606)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J458_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32707.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_7_scaffold_229_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22837..23250)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K7V3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32706.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_7_scaffold_229_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23433..23750)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9YZ37_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32705.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_7_scaffold_229_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24060..24788
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A8I7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32703.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
cell wall binding repeat-containing protein
NECEvent2014_4_7_scaffold_229_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25000..26100)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AKT5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32702.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative metallophosphoesterase
NECEvent2014_4_7_scaffold_229_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26279..27181)
DNA (903bp) protein (301aa)
Nucleoside-diphosphate-sugar epimerases (EC:4.2.1.46)
UPI0003D63AF4 related cluster n=1 Tax=unknown RepID=UPI0003D63AF4 rbh
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:ETI88363.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.
Displaying 29 items

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