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NECEvent2014_4_7_scaffold_237

Alias: 174_007_scaffold_237

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_237_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

185..448
DNA (264bp) protein (88aa)
Small, acid-soluble spore protein, alpha/beta family n=4 Tax=Clostridium butyricum RepID=B1QXJ8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88065.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
small, acid-soluble spore protein, alpha/beta type
NECEvent2014_4_7_scaffold_237_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

566..1303
DNA (738bp) protein (246aa)
S-adenosylmethionine-dependent methyltransferase n=2 Tax=Clostridium butyricum RepID=B1QXJ7_CLOBU rbh
Methyltransferase type 11 {ECO:0000313|EMBL:EEP54560.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoN
type 11 methyltransferase rbh
NECEvent2014_4_7_scaffold_237_3
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1337..2218
DNA (882bp) protein (294aa)
33 kDa chaperonin n=3 Tax=Clostridium butyricum RepID=B1QXJ6_CLOBU rbh
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1523155 species="Bacteria; Firmicutes; Clostr
hslO; 33 kDa chaperonin
NECEvent2014_4_7_scaffold_237_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2588..3421
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AVV8_CLOBU rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KJZ88054.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN12
methyl-accepting chemotaxis protein (MCP) signaling domain rbh
NECEvent2014_4_7_scaffold_237_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3437..4300
DNA (864bp) protein (288aa)
Metallo-beta-lactamase family protein n=2 Tax=Clostridium butyricum RepID=C4IIY9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89546.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
beta-lactamase
NECEvent2014_4_7_scaffold_237_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4655..5086
DNA (432bp) protein (144aa)
Arginine deiminase {ECO:0000313|EMBL:KJZ89570.1}; EC=3.5.3.6 {ECO:0000313|EMBL:KJZ89570.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
N-dimethylarginine dimethylaminohydrolase n=3 Tax=Clostridium butyricum RepID=C4IIY8_CLOBU
N-Dimethylarginine dimethylaminohydrolase
NECEvent2014_4_7_scaffold_237_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5034..5495
DNA (462bp) protein (154aa)
N-dimethylarginine dimethylaminohydrolase n=3 Tax=Clostridium butyricum RepID=C4IIY8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36159.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
N-Dimethylarginine dimethylaminohydrolase
NECEvent2014_4_7_scaffold_237_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5643..6194
DNA (552bp) protein (184aa)
Transcriptional regulator n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IIY7_CLOBU rbh
Transcriptional regulator {ECO:0000313|EMBL:KJZ88062.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
helix-turn-helix domain-containing protein
NECEvent2014_4_7_scaffold_237_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6196..6381
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8J1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89551.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_4_7_scaffold_237_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6414..7850
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AVW5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36162.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
amino acid/polyamine/organocation transporter
NECEvent2014_4_7_scaffold_237_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7919..9097)
DNA (1179bp) protein (393aa)
Purine catabolism regulatory protein-like family n=2 Tax=Clostridium butyricum RepID=B1QSF3_CLOBU rbh
Regulator of polyketide synthase expression {ECO:0000313|EMBL:KJZ84902.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp
PucR family transcriptional regulator
NECEvent2014_4_7_scaffold_237_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9424..10779
DNA (1356bp) protein (452aa)
4-aminobutyrate transaminase {ECO:0000313|EMBL:EEP54137.1}; EC=2.6.1.19 {ECO:0000313|EMBL:EEP54137.1};; EC=2.6.1.22 {ECO:0000313|EMBL:EEP54137.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostrid
gabT; 4-aminobutyrate aminotransferase (EC:2.6.1.19)
4-aminobutyrate aminotransferase n=2 Tax=Clostridium butyricum RepID=B1QSF4_CLOBU rbh
NECEvent2014_4_7_scaffold_237_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11149..12279
DNA (1131bp) protein (377aa)
1,3-propanediol dehydrogenase {ECO:0000313|EMBL:KJZ84894.1}; EC=1.1.1.202 {ECO:0000313|EMBL:KJZ84894.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
1,3-propanediol dehydrogenase n=2 Tax=Clostridium butyricum RepID=B1QSF5_CLOBU rbh
iron-containing alcohol dehydrogenase
NECEvent2014_4_7_scaffold_237_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12324..13538
DNA (1215bp) protein (405aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1523154 species="Bacteria; Fir
acetylornithine aminotransferase apoenzyme (EC:2.6.1.17 2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8J8_CLOBU rbh
NECEvent2014_4_7_scaffold_237_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13868..14233
DNA (366bp) protein (122aa)
Chemotaxis protein CheY n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K527_CLOBU
Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY {ECO:0000313|EMBL:KJZ84897.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
response regulator receiver protein
NECEvent2014_4_7_scaffold_237_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14520..14852
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIL1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84887.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_237_trna_1
unknown

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comp(14945..15016)
DNA (72bp)
transferRNA
NECEvent2014_4_7_scaffold_237_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15168..15872)
DNA (705bp) protein (235aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QSF9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36169.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_7_scaffold_237_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16158..17066
DNA (909bp) protein (303aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=N9Z8V7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36170.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ytxC; putative sporulation protein YtxC
NECEvent2014_4_7_scaffold_237_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17255..17749
DNA (495bp) protein (165aa)
Translation initiation factor IF-3 n=3 Tax=Clostridium butyricum RepID=C4IIX7_CLOBU rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
infC; translation initiation factor IF-3
NECEvent2014_4_7_scaffold_237_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17770..17967
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=3 Tax=Clostridium butyricum RepID=C4IIX6_CLOBU
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rpmI; 50S ribosomal protein L35
NECEvent2014_4_7_scaffold_237_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17999..18355
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=3 Tax=Clostridium butyricum RepID=C4IIX5_CLOBU
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rplT; 50S ribosomal protein L20
NECEvent2014_4_7_scaffold_237_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18439..19785
DNA (1347bp) protein (449aa)
V-type sodium ATP synthase, J subunit {ECO:0000313|EMBL:EEP54127.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EEP54127.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
V-type sodium ATP synthase, J subunit n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IIX4_CLOBU rbh
TrkH family potassium uptake protein
NECEvent2014_4_7_scaffold_237_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19898..20563
DNA (666bp) protein (222aa)
Potassium uptake protein n=2 Tax=Clostridium butyricum RepID=B1QSU2_CLOBU rbh
Potassium uptake protein {ECO:0000313|EMBL:EEP54800.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
potassium uptake protein
NECEvent2014_4_7_scaffold_237_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20544..21368
DNA (825bp) protein (275aa)
ysgA; tRNA/rRNA methyltransferase YsgA (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8L4_CLOBU rbh
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:ETI90725.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum D
NECEvent2014_4_7_scaffold_237_25
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21621..22826
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K521_CLOBU rbh
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:KJZ83569.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;
pyridine nucleotide-disulfide oxidoreductase
NECEvent2014_4_7_scaffold_237_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23387..24406
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
pheS; phenylalanine--tRNA ligase alpha subunit PheS (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=3 Tax=Clostridium butyricum RepID=B1QSU5_CLOBU rbh
NECEvent2014_4_7_scaffold_237_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24659..27037
DNA (2379bp) protein (793aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATX7_CLOBU rbh
Displaying 28 items

View Taxonomy