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NECEvent2014_4_7_scaffold_286

Alias: 174_007_scaffold_286

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_286_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

104..919
DNA (816bp) protein (272aa)
nitric oxide dioxygenase (EC:1.14.12.17)
Oxidoreductase NAD-binding domain protein n=2 Tax=Clostridium butyricum RepID=M8K916_CLOBU rbh
Oxidoreductase, FAD-binding {ECO:0000313|EMBL:KJZ85106.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_7_scaffold_286_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1181..2083)
DNA (903bp) protein (301aa)
YrhM n=2 Tax=Clostridium butyricum RepID=M8JMJ0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35480.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
protein of unknown function DUF3298-containing protein
NECEvent2014_4_7_scaffold_286_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2073..2582)
DNA (510bp) protein (170aa)
RNA polymerase sigma-70 factor n=2 Tax=Clostridium butyricum RepID=M8JNT5_CLOBU rbh
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENZ35481.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium but
RNA polymerase, sigma subunit, SigV
NECEvent2014_4_7_scaffold_286_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2840..4258
DNA (1419bp) protein (473aa)
Diguanylate cyclase domain protein n=2 Tax=Clostridium butyricum RepID=M8JDC6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85122.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative methyl-accepting chemotaxis protein
NECEvent2014_4_7_scaffold_286_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4453..6180
DNA (1728bp) protein (576aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHB5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85117.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
iron transporter FeoB
NECEvent2014_4_7_scaffold_286_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6449..7312
DNA (864bp) protein (288aa)
UPI0003D65ECF related cluster n=1 Tax=unknown RepID=UPI0003D65ECF rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI90772.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_4_7_scaffold_286_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7552..8565
DNA (1014bp) protein (338aa)
epsJ2; glycosyltransferase EpsJ (EC:2.4.-.-)
Glycosyl transferase, group 2 family protein n=2 Tax=Clostridium butyricum RepID=B1QW00_CLOBU rbh
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EEP52715.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str
NECEvent2014_4_7_scaffold_286_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8734..9588
DNA (855bp) protein (285aa)
Lipopolysaccharide cholinephosphotransferase LicD1 {ECO:0000313|EMBL:KJZ85130.1}; EC=2.7.8.- {ECO:0000313|EMBL:KJZ85130.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
LicD family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMJ4_CLOBU rbh
LicD family protein
NECEvent2014_4_7_scaffold_286_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9853..10836
DNA (984bp) protein (328aa)
CpsIaI n=4 Tax=Clostridium butyricum RepID=B1QW02_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85128.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
cell wall biosynthesis glycosyltransferase
NECEvent2014_4_7_scaffold_286_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10954..12762
DNA (1809bp) protein (603aa)
Capsular polysaccharide biosynthesis protein n=4 Tax=Clostridium butyricum RepID=B1QW03_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88485.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
polysaccharide biosynthesis protein CapD
NECEvent2014_4_7_scaffold_286_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12765..14264
DNA (1500bp) protein (500aa)
UPI0003D63697 related cluster n=1 Tax=unknown RepID=UPI0003D63697 rbh
Teichuronic acid biosynthesis protein TuaE, putative secreted polysaccharide polymerase {ECO:0000313|EMBL:KJZ85142.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
putative liporotein
NECEvent2014_4_7_scaffold_286_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14415..15479)
DNA (1065bp) protein (355aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KJZ85153.1}; EC=5.1.3.14 {ECO:0000313|EMBL:KJZ85153.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K928_CLOBU rbh
NECEvent2014_4_7_scaffold_286_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15800..17824
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z706_CLOBU rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KJZ85099.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN12
methyl-accepting chemotaxis protein
NECEvent2014_4_7_scaffold_286_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18097..19317
DNA (1221bp) protein (407aa)
Glycosyl transferase, group 1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNU6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35491.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
WblI protein
NECEvent2014_4_7_scaffold_286_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19332..19937
DNA (606bp) protein (202aa)
Lipid carrier : UDP-N-acetylgalactosaminyltransferase {ECO:0000313|EMBL:KJZ85126.1}; EC=2.4.1.- {ECO:0000313|EMBL:KJZ85126.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
wcaJ; UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase WcaJ (EC:2.7.8.31)
Bacterial sugar transferase n=2 Tax=Clostridium butyricum RepID=M8JDD6_CLOBU rbh
NECEvent2014_4_7_scaffold_286_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20217..21335
DNA (1119bp) protein (373aa)
Myo-inositol 2-dehydrogenase {ECO:0000313|EMBL:KJZ85110.1}; EC=1.1.1.18 {ECO:0000313|EMBL:KJZ85110.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
yrbE2; oxidoreductase YrbE (EC:1.-.-.-)
Oxidoreductase domain protein n=2 Tax=Clostridium butyricum RepID=M8KHC6_CLOBU rbh
NECEvent2014_4_7_scaffold_286_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21386..22663)
DNA (1278bp) protein (426aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4ILS2_CLOBU rbh
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EEP52802.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
brnQ; branched-chain amino acid transport system II carrier protein
NECEvent2014_4_7_scaffold_286_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23005..23163)
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4ILS3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52877.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
Displaying 18 items

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