ggKbase home page

NECEvent2014_4_7_scaffold_305

Alias: 174_007_scaffold_305

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_305_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(145..1023)
DNA (879bp) protein (293aa)
prmA1; ribosomal protein L11 methyltransferase PrmA (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A8I3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32698.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_7_scaffold_305_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1120..1680)
DNA (561bp) protein (187aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
UPI0003D5AA88 related cluster n=1 Tax=unknown RepID=UPI0003D5AA88 rbh
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ETI90121.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_4_7_scaffold_305_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1699..2760)
DNA (1062bp) protein (354aa)
Glycerol dehydrogenase {ECO:0000313|EMBL:KJZ88688.1}; EC=1.1.1.6 {ECO:0000313|EMBL:KJZ88688.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
3-dehydroquinate synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEJ4_CLOBU rbh
3-dehydroquinate synthase
NECEvent2014_4_7_scaffold_305_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2902..3279)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QW99_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP56247.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
Protein of unknown function (DUF2500).
NECEvent2014_4_7_scaffold_305_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3341..6067)
DNA (2727bp) protein (909aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIX0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32694.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
adenosinetriphosphatase
NECEvent2014_4_7_scaffold_305_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6346..7257)
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=4 Tax=Clostridium butyricum RepID=B1QWA1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32693.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ywbI; HTH-type transcriptional regulator YwbI
NECEvent2014_4_7_scaffold_305_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7528..8499
DNA (972bp) protein (324aa)
Permease of the drug/metabolite transporter n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD76_CLOBU rbh
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:KJZ88647.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
permease
NECEvent2014_4_7_scaffold_305_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8829..9068
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9YYM0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88649.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_7_scaffold_305_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9139..10911)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YZ26_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32690.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_7_scaffold_305_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11360..12442)
DNA (1083bp) protein (361aa)
Glycerol dehydrogenase {ECO:0000313|EMBL:KJZ88665.1}; EC=1.1.1.6 {ECO:0000313|EMBL:KJZ88665.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIW6_CLOBU rbh
NECEvent2014_4_7_scaffold_305_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12565..14112)
DNA (1548bp) protein (516aa)
Ferredoxin--sulfite reductase {ECO:0000313|EMBL:KJZ88659.1}; EC=1.8.7.1 {ECO:0000313|EMBL:KJZ88659.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
Nitrite/sulfite reductase 4Fe-4S domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JZB6_CLOBU rbh
ferredoxin-nitrite reductase
NECEvent2014_4_7_scaffold_305_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14332..15000)
DNA (669bp) protein (223aa)
Serine/threonine protein phosphatase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCM1_CLOBU rbh
Protein serine/threonine phosphatase PrpC, regulation of stationary phase {ECO:0000313|EMBL:KJZ88677.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
serine/threonine protein phosphatase
NECEvent2014_4_7_scaffold_305_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15255..15752
DNA (498bp) protein (166aa)
Transcription elongation factor GreA n=3 Tax=Clostridium butyricum RepID=B1QWA8_CLOBU rbh
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clost
transcription elongation factor GreA
NECEvent2014_4_7_scaffold_305_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15841..17118)
DNA (1278bp) protein (426aa)
Putative extracellular solute-binding protein, family 1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J3R3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32685.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family
NECEvent2014_4_7_scaffold_305_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17131..19128)
DNA (1998bp) protein (666aa)
Methyl-accepting chemotaxis protein n=2 Tax=Clostridium butyricum RepID=M8K7F1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32684.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
methyl-accepting chemotaxis sensory transducer
NECEvent2014_4_7_scaffold_305_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19388..19492)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A8G4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32683.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_7_scaffold_305_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19638..20159)
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JE14_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88675.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_305_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20343..21725)
DNA (1383bp) protein (461aa)
RelA/spoT family protein n=2 Tax=Clostridium butyricum RepID=B1QWB3_CLOBU rbh
RelA/spoT family protein {ECO:0000313|EMBL:EEP56418.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_7_scaffold_305_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21877..22392)
DNA (516bp) protein (172aa)
Acetyltransferase n=2 Tax=Clostridium butyricum RepID=M8JZD2_CLOBU rbh
PhnO protein {ECO:0000313|EMBL:KJZ88674.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
N-acetyltransferase GCN5
Displaying 19 items

View Taxonomy