ggKbase home page

NECEvent2014_4_7_scaffold_329

Alias: 174_007_scaffold_329

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_329_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

NECEvent2014_4_7_scaffold_329_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73..1215)
DNA (1143bp) protein (381aa)
yugH1; putative aminotransferase YugH (EC:2.6.1.-)
Aminotransferase, classes I and II n=3 Tax=Clostridium butyricum RepID=C4IJ09_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36139.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_7_scaffold_329_3
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1495..2205
DNA (711bp) protein (237aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase n=3 Tax=Clostridium butyricum RepID=C4IJ10_CLOBU rbh
tetrahydrodipicolinate succinyltransferase domain-containing protein
NECEvent2014_4_7_scaffold_329_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2327..5302)
DNA (2976bp) protein (992aa)
UPI0003D5CAC1 related cluster n=1 Tax=unknown RepID=UPI0003D5CAC1 rbh
Pullulanase, type I {ECO:0000313|EMBL:ETI90024.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
amyX; alpha-dextran endo-1,6-alpha-glucosidase
NECEvent2014_4_7_scaffold_329_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5604..6266)
DNA (663bp) protein (221aa)
Single-stranded DNA binding protein n=3 Tax=Clostridium butyricum RepID=C4IJ12_CLOBU rbh
Surface antigen {ECO:0000313|EMBL:KJZ97176.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
single-strand binding protein/primosomal replication protein
NECEvent2014_4_7_scaffold_329_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6372..7136)
DNA (765bp) protein (255aa)
Polysaccharide deacetylase family protein n=4 Tax=Clostridium butyricum RepID=B1QSU0_CLOBU rbh
Polysaccharide deacetylase family sporulation protein PdaB {ECO:0000313|EMBL:ENZ36135.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
polysaccharide deacetylase
NECEvent2014_4_7_scaffold_329_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7259..7783
DNA (525bp) protein (175aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QST9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85213.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_329_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7838..8779)
DNA (942bp) protein (314aa)
UPI0003D5F543 related cluster n=1 Tax=unknown RepID=UPI0003D5F543 rbh
40-residue yvtn family beta-propeller repeat protein {ECO:0000313|EMBL:ETI90020.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
YVTN beta-propeller repeat-containing protein rbh
NECEvent2014_4_7_scaffold_329_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9026..9274
DNA (249bp) protein (83aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QST7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85215.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_329_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9334..11289)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8E2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36131.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HIRAN domain protein
NECEvent2014_4_7_scaffold_329_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11340..12647)
DNA (1308bp) protein (436aa)
Dihydrofolate synthase/Folylpolyglutamate synthase {ECO:0000313|EMBL:KJZ92093.1}; EC=6.3.2.12 {ECO:0000313|EMBL:KJZ92093.1};; EC=6.3.2.17 {ECO:0000313|EMBL:KJZ92093.1};; TaxID=1523155 species="Bacteri
folC; folylpolyglutamate synthase FolC (EC:6.3.2.17)
FolC protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8Q5_CLOBU rbh
NECEvent2014_4_7_scaffold_329_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12962..13822)
DNA (861bp) protein (287aa)
Drug efflux protein n=2 Tax=Clostridium butyricum RepID=B1QST4_CLOBU rbh
Integral membrane protein TerC {ECO:0000313|EMBL:EEP53670.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str
alx2; inner membrane protein Alx
NECEvent2014_4_7_scaffold_329_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13964..16606)
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
UPI0003D674DE related cluster n=1 Tax=unknown RepID=UPI0003D674DE rbh
valS; valyl-tRNA synthetase
NECEvent2014_4_7_scaffold_329_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17194..17481
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QST2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54263.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_7_scaffold_329_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17515..18387)
DNA (873bp) protein (291aa)
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:KJZ85206.1}; EC=3.4.17.13 {ECO:0000313|EMBL:KJZ85206.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
LD-carboxypeptidase family protein n=2 Tax=Clostridium butyricum RepID=B1QST1_CLOBU rbh
LD-carboxypeptidase family protein
NECEvent2014_4_7_scaffold_329_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18445..20016)
DNA (1572bp) protein (524aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
ydiF3; acetate CoA-transferase YdiF (EC:2.8.3.8)
Acetate CoA-transferase YdiF n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8Q0_CLOBU rbh
NECEvent2014_4_7_scaffold_329_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20233..20859)
DNA (627bp) protein (209aa)
Sugar phosphate aldolase n=2 Tax=Clostridium butyricum RepID=B1QSS9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85208.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L-ribulose-5-phosphate 4-epimerase
Displaying 17 items

View Taxonomy