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NECEvent2014_4_7_scaffold_366

Alias: 174_007_scaffold_366

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_366_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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123..1517
DNA (1395bp) protein (465aa)
SH3, type 3 domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J2Z5_CLOBU rbh
Ligand-binding protein SH3 {ECO:0000313|EMBL:KHD14890.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
SH3 type 3 domain-containing protein
NECEvent2014_4_7_scaffold_366_2
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1592..1780
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QY77_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91890.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
NECEvent2014_4_7_scaffold_366_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1990..3072
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=9978
Phosphoserine aminotransferase n=2 Tax=Clostridium butyricum RepID=M8JYN1_CLOBU rbh
MFS transporter
NECEvent2014_4_7_scaffold_366_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3567..4475
DNA (909bp) protein (303aa)
serA; D-3-phosphoglycerate dehydrogenase SerA (EC:1.1.1.95)
D-isomer specific 2-hydroxyacid dehydrogenase family protein n=2 Tax=Clostridium butyricum RepID=M8JBZ8_CLOBU rbh
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ENZ29543.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.
NECEvent2014_4_7_scaffold_366_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4706..5962
DNA (1257bp) protein (419aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QY80_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88883.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_7_scaffold_366_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6265..6444
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86227.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_4_7_scaffold_366_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6408..8165
DNA (1758bp) protein (586aa)
5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase {ECO:0000313|EMBL:KJZ86188.1}; EC=3.2.2.16 {ECO:0000313|EMBL:KJZ86188.1};; EC=3.2.2.9 {ECO:0000313|EMBL:KJZ86188.1};; TaxID=1523
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YQ10_CLOBU rbh
extracellular solute-binding protein
NECEvent2014_4_7_scaffold_366_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8244..9206
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YPH8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29546.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
appB; Oligopeptide transport system permease protein AppB
NECEvent2014_4_7_scaffold_366_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9220..10116
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABL9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29547.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
binding-protein-dependent transport systems inner membrane component
NECEvent2014_4_7_scaffold_366_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10128..11123
DNA (996bp) protein (332aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Clostridium butyricum 60E.3 RepID=N9ZZ52_CLOBU rbh
Oligopeptide transport system permease protein OppB {ECO:0000313|EMBL:KJZ88865.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
appD; Oligopeptide transport ATP-binding protein AppD
NECEvent2014_4_7_scaffold_366_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11123..12106
DNA (984bp) protein (328aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8JDA2_CLOBU rbh
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:KJZ88866.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
appF1; Oligopeptide transport ATP-binding protein AppF
NECEvent2014_4_7_scaffold_366_12
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12178..12453
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YQ15_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91891.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_4_7_scaffold_366_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12586..13278)
DNA (693bp) protein (231aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {E
mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN (EC:3.2.2.9)
MTA/SAH nucleosidase n=2 Tax=Clostridium butyricum RepID=M8K6Q3_CLOBU rbh
NECEvent2014_4_7_scaffold_366_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13731..14465
DNA (735bp) protein (245aa)
Dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis family 1 n=4 Tax=Clostridium butyricum RepID=B1QY82_CLOBU rbh
CsdL protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway {ECO:0000313|EMBL:KJZ88880.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
yrvM; protein YrvM
NECEvent2014_4_7_scaffold_366_15
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14689..15639
DNA (951bp) protein (317aa)
yjcK; putative ribosomal-protein-alanine acetyltransferase YjcK (EC:2.3.1.128)
Acetyltransferase, GNAT family n=2 Tax=Clostridium butyricum RepID=M8JC08_CLOBU rbh
Ribosomal-protein-S5p-alanine acetyltransferase {ECO:0000313|EMBL:KJZ91886.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
NECEvent2014_4_7_scaffold_366_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15677..16531
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A9X2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29554.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcription antiterminator LicT
NECEvent2014_4_7_scaffold_366_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16791..18476
DNA (1686bp) protein (562aa)
PTS system, glucose-like IIB component (EC:2.7.1.69)
PTS system, glucose-like IIB component n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YQ18_CLOBU rbh
PTS system, glucose-like IIB component {ECO:0000313|EMBL:ENZ29555.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricu
NECEvent2014_4_7_scaffold_366_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18653..19216)
DNA (564bp) protein (188aa)
ptsG: PTS system glucose-specific EIIBCA component (EC:2.7.1.69 2.7.1.-)
Pts system N-acetylglucosamine-specific eiicba component n=4 Tax=Clostridium butyricum RepID=B1QY86_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86182.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Displaying 18 items

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