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NECEvent2014_4_7_scaffold_473

Alias: 174_007_scaffold_473

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_473_trna_5
unknown

Not on your lists

comp(5..76)
DNA (72bp)
transferRNA
NECEvent2014_4_7_scaffold_473_trna_4
unknown

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comp(362..433)
DNA (72bp)
transferRNA
NECEvent2014_4_7_scaffold_473_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(614..2119)
DNA (1506bp) protein (502aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
lysS; lysine--tRNA ligase LysS (EC:6.1.1.6)
Lysine--tRNA ligase n=4 Tax=Clostridium butyricum RepID=B1R1R9_CLOBU rbh
NECEvent2014_4_7_scaffold_473_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2134..2619)
DNA (486bp) protein (162aa)
Transcription elongation factor GreA n=4 Tax=Clostridium butyricum RepID=B1R1S0_CLOBU rbh
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1523156 species="Bacteri
greA1; transcription elongation factor GreA
NECEvent2014_4_7_scaffold_473_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2966..3931)
DNA (966bp) protein (322aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
dus; tRNA-dihydrouridine synthase 1 (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J5Q1_CLOBU rbh
NECEvent2014_4_7_scaffold_473_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3939..4721)
DNA (783bp) protein (261aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
Type III pantothenate kinase n=4 Tax=Clostridium butyricum RepID=B1R1S2_CLOBU rbh
pantothenate kinase
NECEvent2014_4_7_scaffold_473_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4850..6520)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1523155 sp
fhs; formate--tetrahydrofolate ligase Fhs (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K1B4_CLOBU rbh
NECEvent2014_4_7_scaffold_473_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6801..8606)
DNA (1806bp) protein (602aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
ftsH1; ATP-dependent zinc metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACE2_CLOBU rbh
NECEvent2014_4_7_scaffold_473_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8668..9207)
DNA (540bp) protein (180aa)
Hypoxanthine phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1R1S6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83345.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypoxanthine phosphoribosyltransferase
NECEvent2014_4_7_scaffold_473_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9209..10588)
DNA (1380bp) protein (460aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tilS; tRNA(Ile)-lysidine synthase TilS (EC:6.3.4.19)
tRNA(Ile)-lysidine synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AAM9_CLOBU rbh
NECEvent2014_4_7_scaffold_473_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10737..13133)
DNA (2397bp) protein (799aa)
spoIIE; stage II sporulation protein E (EC:3.1.3.16)
Stage II sporulation protein E n=2 Tax=Clostridium butyricum RepID=M8K9F2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83336.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_4_7_scaffold_473_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13547..14485)
DNA (939bp) protein (313aa)
Malonate transporter n=2 Tax=Clostridium butyricum RepID=M8K1B8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83333.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative malate transporter
NECEvent2014_4_7_scaffold_473_trna_3
unknown

Not on your lists

comp(14572..14657)
DNA (86bp)
transferRNA
NECEvent2014_4_7_scaffold_473_trna_2
unknown

Not on your lists

comp(14676..14748)
DNA (73bp)
transferRNA
NECEvent2014_4_7_scaffold_473_trna_1
unknown

Not on your lists

comp(14771..14856)
DNA (86bp)
transferRNA
Displaying 15 items

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