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NECEvent2014_4_7_scaffold_590

Alias: 174_007_scaffold_590

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_590_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(294..869)
DNA (576bp) protein (192aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=R0ABZ7_CLOBU rbh
Putative sporulation protein YyaC {ECO:0000313|EMBL:EEP52445.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4
yyaC3; putative sporulation protein YyaC
NECEvent2014_4_7_scaffold_590_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(926..2077)
DNA (1152bp) protein (384aa)
Cysteine desulfurase {ECO:0000313|EMBL:KJZ87028.1}; EC=2.8.1.7 {ECO:0000313|EMBL:KJZ87028.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
csd3; cysteine desulfurase Csd (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSA1_CLOBU rbh
NECEvent2014_4_7_scaffold_590_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2131..2778)
DNA (648bp) protein (216aa)
LysE type translocator n=4 Tax=Clostridium butyricum RepID=B1QSP3_CLOBU rbh
Translocator protein, LysE family {ECO:0000313|EMBL:KJZ87030.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C
putative threonine efflux protein
NECEvent2014_4_7_scaffold_590_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2931..3170
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JFL3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30292.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein DUF3343
NECEvent2014_4_7_scaffold_590_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3194..4096
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1E5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30293.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mechanosensitive ion channel family protein
NECEvent2014_4_7_scaffold_590_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4096..4290
DNA (195bp) protein (65aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QSP6_CLOBU
Conserved domain protein {ECO:0000313|EMBL:EEP52436.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_7_scaffold_590_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4392..4679
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=4 Tax=Clostridium butyricum RepID=B1QSP7_CLOBU
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rpsF; 30S ribosomal protein S6
NECEvent2014_4_7_scaffold_590_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4693..5145
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=4 Tax=Clostridium butyricum RepID=B1QSP8_CLOBU rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=997898 species="Bacteria; Firmicutes; Clostrid
single-strand binding protein
NECEvent2014_4_7_scaffold_590_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5174..5431
DNA (258bp) protein (86aa)
30S ribosomal protein S18 n=4 Tax=Clostridium butyricum RepID=B1QSP9_CLOBU
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str.
rpsR; 30S ribosomal protein S18
NECEvent2014_4_7_scaffold_590_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5705..6034
DNA (330bp) protein (110aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QSQ0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93292.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
MazG-like family
NECEvent2014_4_7_scaffold_590_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6055..7992
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AC06_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30299.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
phosphoesterase domain-containing protein
NECEvent2014_4_7_scaffold_590_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7995..8441
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=4 Tax=Clostridium butyricum RepID=B1QSQ2_CLOBU
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rplI; 50S ribosomal protein L9
NECEvent2014_4_7_scaffold_590_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8454..10349
DNA (1896bp) protein (632aa)
lon3; Lon protease 2 (EC:3.4.21.53)
ATP-dependent protease, Lon family n=3 Tax=Clostridium butyricum RepID=B1QSQ3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87010.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_7_scaffold_590_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10498..11778
DNA (1281bp) protein (427aa)
dnaC; replicative DNA helicase DnaC (EC:3.6.4.12)
Replicative DNA helicase n=2 Tax=Clostridium butyricum RepID=M8JFM2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87014.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Displaying 14 items

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