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NECEvent2014_4_7_scaffold_24_31

Organism: NECEvent2014_4_7_Clostridium_butyricum_28_16

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(39052..39864)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID= similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 270.0
  • Bit_score: 539
  • Evalue 3.80e-150
aroE1; shikimate dehydrogenase AroE (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 269.0
  • Bit_score: 415
  • Evalue 9.70e-114
Shikimate dehydrogenase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU10_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 270.0
  • Bit_score: 538
  • Evalue 4.60e-150
  • rbh

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Taxonomy

Clostridium sp. IBUN13A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 813
ATGGATTTCTATGGAGTTTTAGGAGAAAAGCTTCCTCACAGTATTTCACCAGAAATACATGAAGAAATTTTTTCACTATTAAATATTGATGGCGCATATAAAATATTTGAAGTAGAAAAAAAAGATATCAGTAAATTGTGTGATTCATTAAGAATTTTAAAAATTAAAGGTACTAATGTGACGATACCTTATAAGCAAGAAGTTATGAAATATCTTGATTCAATTTCAGAAGAAGCAGAAAAAATAGGTGCTGTTAATACAATCTATTTAAAAGATGGAAAGTTATATGGATATAATTCTGATTACTTTGGATTTGGAACTATTATAAAGAAATATGATGTAGAACTTGAAGGTAAAATTACTATGGTTTTAGGGACAGGAGGAGCATCAAAGGCTGTAGTTACATACCTGCTTGATAAAGGTGTAAAAAAAATATATTTAGTATCAAGAAATCATAAAAATGAATCTGATTATAAAGATGATAGAGTAGAGTATACAACTTATGAAGAGATAGAAGAAATTAAAGGTGATGTTATTATTAATACAACTCCAGTAGGTATGTATCCAAAGACAGGAGTAAGCCCTGTAGGAGAGAGTATTATAAAAAACTTTGATACATTGATAGATATAATTTATAATCCAAGAGTAACTGAATTTTTAGCAATTGGGGAAAAATTAAATAAAAAGGTATGTGGTGGTCTTGAAATGTTAGTAGGTCAGGCAATCAAGTCTGAAGAAGTATGGCAGGAAATGGATATAGATGATGAGGTTTTTGATAAAGTATTTTCTAAAATAAATGAAAACTTTAAATAA
PROTEIN sequence
Length: 271
MDFYGVLGEKLPHSISPEIHEEIFSLLNIDGAYKIFEVEKKDISKLCDSLRILKIKGTNVTIPYKQEVMKYLDSISEEAEKIGAVNTIYLKDGKLYGYNSDYFGFGTIIKKYDVELEGKITMVLGTGGASKAVVTYLLDKGVKKIYLVSRNHKNESDYKDDRVEYTTYEEIEEIKGDVIINTTPVGMYPKTGVSPVGESIIKNFDTLIDIIYNPRVTEFLAIGEKLNKKVCGGLEMLVGQAIKSEEVWQEMDIDDEVFDKVFSKINENFK*