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NECEvent2014_4_7_scaffold_1225

Alias: 174_007_scaffold_1225

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_1225_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..475
DNA (474bp) protein (158aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA dimethylallyltransferase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQI0_CLOPF
NECEvent2014_4_7_scaffold_1225_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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519..761
DNA (243bp) protein (81aa)
RNA-binding protein Hfq n=9 Tax=Clostridium perfringens RepID=HFQ_CLOP1
RNA chaperone Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_4_7_scaffold_1225_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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866..2146
DNA (1281bp) protein (427aa)
Aluminum resistance protein n=3 Tax=Clostridium perfringens RepID=B1RBK2_CLOPF rbh
Aluminum resistance protein {ECO:0000313|EMBL:EDT22395.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
aluminum resistance protein
NECEvent2014_4_7_scaffold_1225_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2407..3312
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQI3_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87072.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_4_7_scaffold_1225_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3492..4103)
DNA (612bp) protein (204aa)
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=445334 species="Bacteria; Firmicu
LexA repressor n=5 Tax=Clostridium perfringens RepID=LEXA_CLOP1 rbh
NECEvent2014_4_7_scaffold_1225_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4311..4703
DNA (393bp) protein (131aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CVI4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17302.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_7_scaffold_1225_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4794..5291)
DNA (498bp) protein (166aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTP6_CLOPF
xerC; site-specific tyrosine recombinase XerC
Probable integrase/recombinase {ECO:0000313|EMBL:BAB80869.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
Displaying 7 items

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