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NECEvent2014_4_7_scaffold_328

Alias: 174_007_scaffold_328

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_328_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(42..329)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CLS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR28131.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_4_7_scaffold_328_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(335..2326)
DNA (1992bp) protein (664aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=457396 species="Bacteria
DNA ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC55_9CLOT
ligA; NAD-dependent DNA ligase LigA
NECEvent2014_4_7_scaffold_328_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2599..5847)
DNA (3249bp) protein (1083aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFR9_9CLOT
NECEvent2014_4_7_scaffold_328_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6605..7321)
DNA (717bp) protein (239aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Pseudouridine synthase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1S0_9CLOT
pseudouridine synthase family protein
NECEvent2014_4_7_scaffold_328_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7449..8222)
DNA (774bp) protein (258aa)
Lytic transglycosylase catalytic n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGG9_9CLOT
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EOR28135.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme
lytic murein transglycosylase
NECEvent2014_4_7_scaffold_328_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8472..10556)
DNA (2085bp) protein (695aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96618.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Y Y Y domain protein
NECEvent2014_4_7_scaffold_328_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10680..11123)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEL7_9CLOT
UPF0178 protein CSBG_00243 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein DUF188
NECEvent2014_4_7_scaffold_328_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11123..12478)
DNA (1356bp) protein (452aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6E2_9CLOT rbh
NECEvent2014_4_7_scaffold_328_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12860..13282
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96613.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
GCN5-related N-acetyltransferase
NECEvent2014_4_7_scaffold_328_10
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

13449..14399
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2FK26_TRIVA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EAX94735.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
NECEvent2014_4_7_scaffold_328_11
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14631..14972)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XWK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00012.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_4_7_scaffold_328_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15146..16891)
DNA (1746bp) protein (582aa)
Ammonium transporter n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFP3_9CLOT
Ammonium transporter {ECO:0000313|EMBL:EOR28117.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
ammonium transporter
NECEvent2014_4_7_scaffold_328_13
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17023..17436)
DNA (414bp) protein (138aa)
PF05673 family protein n=1 Tax=Olsenella profusa F0195 RepID=U2TVD7_9ACTN
PF05673 family protein {ECO:0000313|EMBL:ERL10038.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
hypothetical protein
NECEvent2014_4_7_scaffold_328_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17545..19086)
DNA (1542bp) protein (514aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R7_9CLOT rbh
NECEvent2014_4_7_scaffold_328_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19373..20821)
DNA (1449bp) protein (483aa)
guaB; inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2B6_9CLOT rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
Displaying 15 items

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