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NECEvent2014_4_7_scaffold_336

Alias: 174_007_scaffold_336

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_336_trna_1
unknown

Not on your lists

78..160
DNA (83bp)
transferRNA
NECEvent2014_4_7_scaffold_336_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

279..1169
DNA (891bp) protein (297aa)
DNA repair photolyase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG64_9CLOT
DNA repair photolyase {ECO:0000313|EMBL:EOR26206.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
DNA repair photolyase
NECEvent2014_4_7_scaffold_336_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1711..2343
DNA (633bp) protein (211aa)
HAD hydrolase, family IA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHD6_9CLOT
HAD hydrolase, family IA {ECO:0000313|EMBL:EEH98780.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
HAD hydrolase, IA, variant 1 family protein
NECEvent2014_4_7_scaffold_336_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2621..3580
DNA (960bp) protein (320aa)
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:EOR26204.1}; EC=1.1.1.272 {ECO:0000313|EMBL:EOR26204.1};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
2-hydroxyacid dehydrogenase (EC:1.1.1.29)
2-hydroxyacid dehydrogenase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CA15_9CLOT
NECEvent2014_4_7_scaffold_336_4
unknown

Not on your lists

3667..3765
DNA (99bp) protein (33aa)

This feature has no annotations

NECEvent2014_4_7_scaffold_336_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3908..5575
DNA (1668bp) protein (556aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000
leuA1; 2-isopropylmalate synthase LeuA (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3T6_9CLOT rbh
NECEvent2014_4_7_scaffold_336_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5673..7325)
DNA (1653bp) protein (551aa)
aspartate aminotransferase (EC:2.6.1.1)
Aspartate 4-decarboxylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4L5_9CLOT
Aspartate 4-decarboxylase {ECO:0000313|EMBL:EEH98777.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_4_7_scaffold_336_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8410..9792
DNA (1383bp) protein (461aa)
Amino acid carrier protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFW8_9CLOT rbh
Amino acid carrier protein {ECO:0000313|EMBL:EEH98776.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
amino acid ABC transporter
NECEvent2014_4_7_scaffold_336_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10160..11161
DNA (1002bp) protein (334aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG59_9CLOT
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase {ECO:0000313|EMBL:EOR26201.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
phage-related cell wall hydrolase
NECEvent2014_4_7_scaffold_336_9
unknown

Not on your lists

comp(11204..11353)
DNA (150bp) protein (50aa)

This feature has no annotations

NECEvent2014_4_7_scaffold_336_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11355..11624)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H894_9CLOT
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
acylphosphatase
NECEvent2014_4_7_scaffold_336_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11764..12174
DNA (411bp) protein (137aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3T5_9CLOT
NECEvent2014_4_7_scaffold_336_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12232..13293)
DNA (1062bp) protein (354aa)
Spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CA86_9CLOT
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:EOR26198.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
spermidine/putrescine ABC transporter spermidine/putrescine-binding protein
NECEvent2014_4_7_scaffold_336_13
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13280..14092)
DNA (813bp) protein (271aa)
Spermidine/putrescine transport system permease protein PotC n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CA47_9CLOT rbh
Spermidine/putrescine transport system permease protein PotC {ECO:0000313|EMBL:EOR26197.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
spermidine/putrescine transport system permease protein PotC
NECEvent2014_4_7_scaffold_336_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14086..14934)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4L3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98771.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putrescine transport system permease protein PotH
NECEvent2014_4_7_scaffold_336_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14934..15977)
DNA (1044bp) protein (348aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostri
polyamine ABC transporter, ATP-binding family protein (EC:3.6.3.31)
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFW5_9CLOT
NECEvent2014_4_7_scaffold_336_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16000..16539)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98769.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
DNA-binding protein
NECEvent2014_4_7_scaffold_336_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17027..18076
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H892_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98768.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
acetyltransferase domain protein
NECEvent2014_4_7_scaffold_336_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18229..18942
DNA (714bp) protein (238aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
act1; pyruvate formate-lyase-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3T2_9CLOT rbh
NECEvent2014_4_7_scaffold_336_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18981..19610)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4L2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98766.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
3'-5' exonuclease family protein
NECEvent2014_4_7_scaffold_336_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19690..20586)
DNA (897bp) protein (299aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
arginase (EC:3.5.3.1)
Arginase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFW2_9CLOT
Displaying 21 items

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