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NECEvent2014_4_7_scaffold_342

Alias: 174_007_scaffold_342

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_342_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..376
DNA (375bp) protein (125aa)
Peptide chain release factor 3 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGW1_9CLOT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia;
prfC; peptide chain release factor 3
NECEvent2014_4_7_scaffold_342_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(465..1394)
DNA (930bp) protein (310aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3APC5_9CLOT rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFC96332.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi
AraC family transcriptional regulator
NECEvent2014_4_7_scaffold_342_3
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1524..2591
DNA (1068bp) protein (356aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:00002
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=4 Tax=Lachnospiraceae RepID=E9RY24_9FIRM rbh
NECEvent2014_4_7_scaffold_342_4
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2593..4203
DNA (1611bp) protein (537aa)
dioxygenase n=1 Tax=Blautia producta RepID=UPI000379C904 rbh
Uncharacterized protein {ECO:0000313|EMBL:EGC73949.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
D-mannonate oxidoreductase
NECEvent2014_4_7_scaffold_342_5

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4217..5632
DNA (1416bp) protein (472aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HA
D-glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4IWB2_BUTFI rbh
NECEvent2014_4_7_scaffold_342_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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5888..7660
DNA (1773bp) protein (591aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" sou
signal transduction protein (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AN28_9CLOT rbh
NECEvent2014_4_7_scaffold_342_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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7653..9173
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XNT0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY97271.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
NECEvent2014_4_7_scaffold_342_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9324..10652
DNA (1329bp) protein (443aa)
ABC-type sugar transport system, periplasmic component n=2 Tax=Eubacterium RepID=D4JHB4_9FIRM rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBK93011.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Euba
ABC-type sugar transport system, periplasmic component
NECEvent2014_4_7_scaffold_342_9
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10656..11633
DNA (978bp) protein (326aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Eubacterium RepID=D4JHB3_9FIRM rbh
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC70650.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubact
NECEvent2014_4_7_scaffold_342_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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11636..12490
DNA (855bp) protein (285aa)
ABC transporter, permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AN34_9CLOT rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EFC96773.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 1
ABC-type sugar transport system, permease component
NECEvent2014_4_7_scaffold_342_11
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12564..14567
DNA (2004bp) protein (668aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TRW0_9FIRM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC70636.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
NECEvent2014_4_7_scaffold_342_12
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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14583..15209
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D68CCC
Uncharacterized protein {ECO:0000313|EMBL:EOS74093.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Predicted integral membrane protein
NECEvent2014_4_7_scaffold_342_13
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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15326..15985
DNA (660bp) protein (220aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RXV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC73876.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
NECEvent2014_4_7_scaffold_342_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16477..20382
DNA (3906bp) protein (1302aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XC45_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY97267.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
S-layer protein
Displaying 14 items

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