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NECEvent2014_4_7_scaffold_375

Alias: 174_007_scaffold_375

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_375_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1065
DNA (1065bp) protein (355aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C5R5_9CLOT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EOR24647.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoform
cell wall-binding protein
NECEvent2014_4_7_scaffold_375_2
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1407..2120
DNA (714bp) protein (238aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2W3_CLOB8 rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:AJH01906.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerincki
GntR family transcriptional regulator
NECEvent2014_4_7_scaffold_375_3
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2157..3404)
DNA (1248bp) protein (416aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2W4_CLOB8 rbh
mandelate racemase/muconate lactonizing protein
D-galactonate dehydratase family member Cbei_4837; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 5
NECEvent2014_4_7_scaffold_375_4
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3616..4983
DNA (1368bp) protein (456aa)
PTS system, glucose subfamily, IIA subunit n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2W5_CLOB8 rbh
PTS system, glucose subfamily, IIA subunit
PTS system, glucose subfamily, IIA subunit {ECO:0000313|EMBL:ABR36945.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beij
NECEvent2014_4_7_scaffold_375_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5089..5730
DNA (642bp) protein (214aa)
Keto-deoxy-phosphogluconate aldolase {ECO:0000313|EMBL:KIN82888.1}; EC=4.1.2.14 {ECO:0000313|EMBL:KIN82888.1};; EC=4.1.3.16 {ECO:0000313|EMBL:KIN82888.1};; TaxID=1491 species="Bacteria; Firmicutes; Cl
eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (EC:4.1.3.16 4.1.2.14)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Clostridium botulinum CFSAN001627 RepID=M1ZWG2_CLOBO
NECEvent2014_4_7_scaffold_375_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5717..6742
DNA (1026bp) protein (342aa)
2-dehydro-3-deoxygluconokinase (EC:2.7.1.45)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H829_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98605.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_4_7_scaffold_375_7
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6939..7781
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002899959 rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ02011.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
SH3 type 3 domain-containing protein
NECEvent2014_4_7_scaffold_375_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8044..8571
DNA (528bp) protein (176aa)
Riboflavin biosynthesis protein RibD C-domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J3X8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88729.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
dihydrofolate reductase family protein
NECEvent2014_4_7_scaffold_375_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8748..9350
DNA (603bp) protein (201aa)
Uncharacterized protein n=3 Tax=Clostridium botulinum RepID=A7FQS1_CLOB1
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CAL81813.1}; TaxID=441771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Hal
NECEvent2014_4_7_scaffold_375_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9370..10050
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGT6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98316.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cytochrome C biogenesis transmembrane region family protein
NECEvent2014_4_7_scaffold_375_11
unknown

Not on your lists

10143..10382
DNA (240bp) protein (80aa)

This feature has no annotations

NECEvent2014_4_7_scaffold_375_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10629..11219
DNA (591bp) protein (197aa)
Antioxidant, AhpC/TSA family n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KTN1_CLOBM
Redoxin family protein {ECO:0000313|EMBL:KIE46699.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;
thiol-disulfide oxidoreductase ResA
NECEvent2014_4_7_scaffold_375_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11317..12024
DNA (708bp) protein (236aa)
DNA-binding response regulator n=3 Tax=Clostridium botulinum RepID=A5HYF7_CLOBH
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:EPS46384.1}; TaxID=1302425 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CFSAN
NECEvent2014_4_7_scaffold_375_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12014..13402
DNA (1389bp) protein (463aa)
sensor histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
Sensor histidine kinase n=3 Tax=Clostridium botulinum RepID=C3KZ86_CLOB6 rbh
NECEvent2014_4_7_scaffold_375_15
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13740..14621
DNA (882bp) protein (294aa)
Beta-glucoside operon antiterminator n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1ML92_9CLOT rbh
arbG2; beta-glucoside operon antiterminator
Beta-glucoside operon antiterminator {ECO:0000313|EMBL:AGF58684.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharope
NECEvent2014_4_7_scaffold_375_16
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14797..16650
DNA (1854bp) protein (618aa)
bglP7; PTS system beta-glucoside-specific EIIBCA component BglP (EC:2.7.1.69 2.7.1.-)
PTS system beta-glucoside-specific EIIBCA component BglP {ECO:0000313|EMBL:AGF58683.1}; EC=2.7.1.- {ECO:0000313|EMBL:AGF58683.1};; EC=2.7.1.69 {ECO:0000313|EMBL:AGF58683.1};; TaxID=931276 species="Bac
PTS system beta-glucoside-specific EIIBCA component BglP n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MR97_9CLOT rbh
NECEvent2014_4_7_scaffold_375_17
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16677..18131
DNA (1455bp) protein (485aa)
bglH3; aryl-phospho-beta-D-glucosidase BglH (EC:3.2.1.86)
Aryl-phospho-beta-D-glucosidase BglH {ECO:0000313|EMBL:AGF58682.1}; EC=3.2.1.86 {ECO:0000313|EMBL:AGF58682.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
Aryl-phospho-beta-D-glucosidase BglH n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N5J1_9CLOT rbh
NECEvent2014_4_7_scaffold_375_18
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18137..19063
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI000306A6B6 rbh
2-keto-3-deoxygluconate permease {ECO:0000313|EMBL:ETT29603.1}; TaxID=1226754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-19
kdgT2; 2-keto-3-deoxygluconate permease KdgT
Displaying 18 items

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