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NECEvent2014_4_7_scaffold_532

Alias: 174_007_scaffold_532

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_532_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..95
DNA (93bp) protein (31aa)
50S ribosomal protein L21 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F1W5_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
hypothetical protein
NECEvent2014_4_7_scaffold_532_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

101..475
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8N8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99165.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_7_scaffold_532_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


477..776
DNA (300bp) protein (100aa)
50S ribosomal protein L27 n=2 Tax=Clostridium RepID=R9C0K7_9CLOT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU
rpmA; 50S ribosomal protein L27
NECEvent2014_4_7_scaffold_532_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1076..2365
DNA (1290bp) protein (430aa)
GTPase obg n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H506_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostrid
cgtA; Obg family GTPase CgtA
NECEvent2014_4_7_scaffold_532_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2384..2680
DNA (297bp) protein (99aa)
Putative RNA-binding protein, YhbY family n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C1G0_9CLOT
Putative RNA-binding protein, YhbY family {ECO:0000313|EMBL:EOR22830.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sart
protein of unknown function UPF0044
NECEvent2014_4_7_scaffold_532_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2687..3304
DNA (618bp) protein (206aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0F7_9CLOT
NECEvent2014_4_7_scaffold_532_7
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3330..3896
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0M1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR22828.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_4_7_scaffold_532_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3917..5266
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHQ9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99160.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
lytR; transcriptional regulator LytR
NECEvent2014_4_7_scaffold_532_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5490..6392
DNA (903bp) protein (301aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
RluA family pseudouridine synthase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6K0_9CLOT
RluA family pseudouridine synthase
NECEvent2014_4_7_scaffold_532_10
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6625..7911)
DNA (1287bp) protein (429aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C1F5_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EOR22825.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sarta
D-alanyl-D-alanine carboxypeptidase family protein
NECEvent2014_4_7_scaffold_532_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8065..8736
DNA (672bp) protein (224aa)
ComEA protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H505_9CLOT
ComEA protein {ECO:0000313|EMBL:EEH99157.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
comEA; ComE operon protein 1
NECEvent2014_4_7_scaffold_532_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8824..9033
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0L5_9CLOT
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOR22823.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
NECEvent2014_4_7_scaffold_532_13
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9294..9965
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0I7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR22822.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_4_7_scaffold_532_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9995..10390
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8N5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99154.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_7_scaffold_532_15
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10407..11765
DNA (1359bp) protein (453aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C1E9_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EOR22820.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sa
NECEvent2014_4_7_scaffold_532_16
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12402..12968
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Bacillus sp. 1NLA3E RepID=N0ANF3_9BACI rbh
Uncharacterized protein {ECO:0000313|EMBL:CEE00575.1}; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoamylovorans.;"
hypothetical protein
Displaying 16 items

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