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NECEvent2014_4_7_scaffold_561

Alias: 174_007_scaffold_561

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_561_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..134)
DNA (132bp) protein (44aa)
O-antigen polymerase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CLP8_9CLOT
O-antigen polymerase {ECO:0000313|EMBL:EOR28106.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
NECEvent2014_4_7_scaffold_561_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(626..2119)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96580.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
iron-dependent hydrogenase
NECEvent2014_4_7_scaffold_561_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2708..3688)
DNA (981bp) protein (327aa)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7A3_9CLOT rbh
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
biotin
NECEvent2014_4_7_scaffold_561_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3917..5188)
DNA (1272bp) protein (424aa)
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R2_9CLOT
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit {ECO:0000313|EMBL:EEH96579.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
NECEvent2014_4_7_scaffold_561_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5212..6066)
DNA (855bp) protein (285aa)
Tagatose bisphosphate family class II aldolase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG84_9CLOT
Tagatose bisphosphate family class II aldolase {ECO:0000313|EMBL:EEH97928.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
class II aldolase, tagatose bisphosphate family
NECEvent2014_4_7_scaffold_561_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6260..7420)
DNA (1161bp) protein (387aa)
AgaS family putative sugar isomerase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC14_9CLOT
AgaS family putative sugar isomerase {ECO:0000313|EMBL:EEH96577.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43
putative phosphosugar isomerase
NECEvent2014_4_7_scaffold_561_7
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7487..8215)
DNA (729bp) protein (243aa)
GntR family transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGE1_9CLOT rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EOR28110.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagof
bacterial regulatory s, gntR family protein
NECEvent2014_4_7_scaffold_561_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8760..9713)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2A0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96568.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
BadF/BadG/BcrA/BcrD family ATPase
NECEvent2014_4_7_scaffold_561_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10360..11301)
DNA (942bp) protein (314aa)
8-oxoguanine DNA-glycosylase (Ogg) n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC07_9CLOT
8-oxoguanine DNA-glycosylase (Ogg) {ECO:0000313|EMBL:EEH96567.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FA
hypothetical protein
NECEvent2014_4_7_scaffold_561_10
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11620..12462)
DNA (843bp) protein (281aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EOR28058.1}; EC=1.1.1.157 {ECO:0000313|EMBL:EOR28058.1};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
hbd; 3-hydroxybutyryl-CoA dehydrogenase Hbd (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFK1_9CLOT rbh
NECEvent2014_4_7_scaffold_561_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12687..13694)
DNA (1008bp) protein (336aa)
Protein fixB n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C2_9CLOT
Protein fixB {ECO:0000313|EMBL:EEH96565.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
electron transfer flavoprotein, alpha subunit/FixB family protein
NECEvent2014_4_7_scaffold_561_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13715..14494)
DNA (780bp) protein (260aa)
Electron transfer flavoprotein subunit beta/FixA family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG96_9CLOT rbh
Electron transfer flavoprotein subunit beta/FixA family protein {ECO:0000313|EMBL:EOR28060.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
electron transfer flavoprotein subunit beta/FixA family protein
NECEvent2014_4_7_scaffold_561_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14511..15650)
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase, short-chain specific n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H299_9CLOT rbh
Acyl-CoA dehydrogenase, short-chain specific {ECO:0000313|EMBL:EEH96563.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp
bcd; butyryl-CoA dehydrogenase
NECEvent2014_4_7_scaffold_561_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15697..16143)
DNA (447bp) protein (149aa)
crt; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:ABG87270.1}; EC=4.2.1.55 {ECO:0000313|EMBL:ABG87270.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPC7_CLOPF
Displaying 14 items

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