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NECEvent2014_4_7_scaffold_274_9

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA_28_22

near complete RP 48 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 16 / 38 MC: 3
Location: comp(9123..9878)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-F factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4P4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 251.0
  • Bit_score: 451
  • Evalue 5.20e-124
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 251.0
  • Bit_score: 451
  • Evalue 7.30e-124
sigF; sporulation sigma factor SigF similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 245.0
  • Bit_score: 401
  • Evalue 1.80e-109

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 756
ATGGACAATGGAATTGTAAGAAAAGAGGTGTATAATTACGAAGAGAATTCACAATTAATACCTCTAGCCAAGGAAGGTAACCAAGAGGCTATGAATAAGGTTATTGAAATGAATTTACCTCTTGTTTCATCCATTAGCAAAAAGTTTCTTAATAGAGGCTATGATTATGAAGATATTTTTCAAATAGGCTCTATAGGTCTAGTTAAAGCTATCAATAACTTTGATGATAAGTTTAATGTTAAGTTTTCAACTTATGCAGTTCCTATGATTATAGGAGAGATAAAAAGGTTTATTAGAGATGACGGAATAATAAAAGTTAGTAGAAGTGTGAAGACCTTAGCTAGAAAACTTCATTTTGACAAAGAAGCTTTAACTAAAGAATTAGATAGAGAACCTACTATTGAAGAACTATCTAAATATTCAGGAGTTGAAAAAGAAGAAATTATGTTTGCCATAGAATCTTCAGTCAACATGCAATACCTTTATGATACTATTCATCAAGATGATGGAGCACCAGTTTTACTTATAGATAAGCTAAGTGAAAAAGGTGAAGATGATACTGATATGATAAATAGAATTGCTTTAAAAGAAGCTCTCAGAAGCTTAGATAGTAAGTCAAGGCAAGTAATTATGCTTAGATATTTTAAGGATAAAACACAGGTGCAGGTAGCTAAACTTTTAGGAATTAGCCAAGTTCAAGTATCTAGAATTGAGAAGAAAGTATTAGTGATAATGAGAGAGAAATTAAAAGAATAA
PROTEIN sequence
Length: 252
MDNGIVRKEVYNYEENSQLIPLAKEGNQEAMNKVIEMNLPLVSSISKKFLNRGYDYEDIFQIGSIGLVKAINNFDDKFNVKFSTYAVPMIIGEIKRFIRDDGIIKVSRSVKTLARKLHFDKEALTKELDREPTIEELSKYSGVEKEEIMFAIESSVNMQYLYDTIHQDDGAPVLLIDKLSEKGEDDTDMINRIALKEALRSLDSKSRQVIMLRYFKDKTQVQVAKLLGISQVQVSRIEKKVLVIMREKLKE*