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NECEvent2014_4_7_scaffold_274

Alias: 174_007_scaffold_274

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_274_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..947)
DNA (945bp) protein (315aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-
gpr; GPR endopeptidase (EC:3.4.24.78)
GPR endopeptidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B5_9CLOT
NECEvent2014_4_7_scaffold_274_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1122..1385
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHF5_9CLOT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rpsT; ribosomal protein S20
NECEvent2014_4_7_scaffold_274_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1426..2457)
DNA (1032bp) protein (344aa)
DNA polymerase III, delta subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG18_9CLOT
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EEH98840.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA
holA; DNA polymerase III subunit delta
NECEvent2014_4_7_scaffold_274_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2473..4170)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4P2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98841.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
competence protein
NECEvent2014_4_7_scaffold_274_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4193..6688)
DNA (2496bp) protein (832aa)
HAD ATPase, P-type, family IC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V7_9CLOT
HAD ATPase, P-type, family IC {ECO:0000313|EMBL:EEH98842.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
calcium-transporting ATPase
NECEvent2014_4_7_scaffold_274_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6866..7222)
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B7_9CLOT
Stage V sporulation protein AE {ECO:0000313|EMBL:EEH98843.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoVAE; stage V sporulation protein AE
NECEvent2014_4_7_scaffold_274_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7238..8263)
DNA (1026bp) protein (342aa)
Stage V sporulation protein AD n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHF7_9CLOT rbh
Stage V sporulation protein AD {ECO:0000313|EMBL:EEH98844.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoVAD; stage V sporulation protein AD
NECEvent2014_4_7_scaffold_274_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8281..8751)
DNA (471bp) protein (157aa)
Stage V sporulation protein AC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG25_9CLOT
Stage V sporulation protein AC {ECO:0000313|EMBL:EEH98845.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoVAC; stage V sporulation protein AC
NECEvent2014_4_7_scaffold_274_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9123..9878)
DNA (756bp) protein (252aa)
RNA polymerase sigma-F factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4P4_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sigF; sporulation sigma factor SigF
NECEvent2014_4_7_scaffold_274_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9888..10319)
DNA (432bp) protein (144aa)
Anti-sigma F factor {ECO:0000256|HAMAP-Rule:MF_00637}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00637};; Stage II sporulation protein AB {ECO:0000256|HAMAP-Rule:MF_00637}; TaxID=457396 species="Bacteria
spoIIAB: anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V9_9CLOT
NECEvent2014_4_7_scaffold_274_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10333..10668)
DNA (336bp) protein (112aa)
Anti-sigma F factor antagonist n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B8_9CLOT
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
spoIIAA; anti-sigma F factor antagonist
NECEvent2014_4_7_scaffold_274_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10938..13322)
DNA (2385bp) protein (795aa)
ATP-dependent protease n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C770_9CLOT
ATP-dependent protease {ECO:0000313|EMBL:EOR24820.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
putative ATP-dependent protease
NECEvent2014_4_7_scaffold_274_13
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13589..14761)
DNA (1173bp) protein (391aa)
Metallo-beta-lactamase family protein/flavodoxin n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CC84_9CLOT rbh
Metallo-beta-lactamase family protein/flavodoxin {ECO:0000313|EMBL:EOR24821.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
flavodoxin
NECEvent2014_4_7_scaffold_274_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15081..17363)
DNA (2283bp) protein (761aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
Helicase IV n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C693_9CLOT
UvrD/REP helicase
NECEvent2014_4_7_scaffold_274_15
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17637..18257
DNA (621bp) protein (207aa)
TrkA domain-containing protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6B7_9CLOT rbh
TrkA domain-containing protein {ECO:0000313|EMBL:EOR24823.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AA
TrkA domain-containing protein
NECEvent2014_4_7_scaffold_274_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18436..19281)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG34_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98855.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_7_scaffold_274_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19572..20927)
DNA (1356bp) protein (452aa)
UPF0210 protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4P8_9CLOT
UPF0210 protein CSBG_02482 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_7_scaffold_274_18
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20950..21219)
DNA (270bp) protein (90aa)
UPF0237 protein A500_11784 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C698_9CLOT
UPF0237 protein A500_11784 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AA
ACT domain-containing protein
NECEvent2014_4_7_scaffold_274_19
unknown

Not on your lists

comp(21486..22124)
DNA (639bp) protein (213aa)

This feature has no annotations

NECEvent2014_4_7_scaffold_274_20
unknown

Not on your lists

comp(22320..22889)
DNA (570bp) protein (190aa)

This feature has no annotations

NECEvent2014_4_7_scaffold_274_21
Virgibacillus sp. Vm-5, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23013..23699)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Virgibacillus sp. CM-4 RepID=T0J932_9BACI
Signal peptidase I W {ECO:0000313|EMBL:CDQ38945.1}; TaxID=1462526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. Vm-5.;"
signal peptidase, type I
Displaying 21 items

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