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NECEvent2014_4_7_scaffold_157

Alias: 174_007_scaffold_157

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_157_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45..701)
DNA (657bp) protein (219aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEF2_9CLOT rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
phoU; phosphate transport system regulatory protein PhoU
NECEvent2014_4_7_scaffold_157_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(724..1488)
DNA (765bp) protein (255aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
pstB; phosphate ABC transporter, ATP-binding protein (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGN8_9CLOT rbh
NECEvent2014_4_7_scaffold_157_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1513..2337)
DNA (825bp) protein (275aa)
Phosphate ABC transporter permease n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDL5_9CLOT
Phosphate ABC transporter permease {ECO:0000313|EMBL:EOR27372.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoform
pstA; phosphate ABC transporter permease
NECEvent2014_4_7_scaffold_157_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2340..3227)
DNA (888bp) protein (296aa)
Phosphate ABC transporter permease n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDP7_9CLOT
Phosphate ABC transporter permease {ECO:0000313|EMBL:EOR27373.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoform
pstC; phosphate ABC transporter permease
NECEvent2014_4_7_scaffold_157_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3284..4141)
DNA (858bp) protein (286aa)
Phosphate binding protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HER9_9CLOT
Phosphate binding protein {ECO:0000313|EMBL:EEH98210.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
phosphate ABC transporter substrate-binding protein
NECEvent2014_4_7_scaffold_157_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4346..6037)
DNA (1692bp) protein (564aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
resE3; sensor histidine kinase ResE (EC:2.7.13.3)
PAS domain S-box protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H424_9CLOT rbh
NECEvent2014_4_7_scaffold_157_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6040..6738)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H362_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98212.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
phoP; alkaline phosphatase synthesis transcriptional regulatory protein PhoP
NECEvent2014_4_7_scaffold_157_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6751..7488)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7P4_9CLOT rbh
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_7_scaffold_157_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7635..8090)
DNA (456bp) protein (152aa)
Transcriptional repressor NrdR n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGP4_9CLOT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
nrdR; transcriptional regulator NrdR
NECEvent2014_4_7_scaffold_157_10
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8167..8478)
DNA (312bp) protein (104aa)
Sporulation protein, YlmC/YmxH family n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDQ1_9CLOT
Sporulation protein, YlmC/YmxH family {ECO:0000313|EMBL:EOR27378.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagof
sporulation protein, YlmC/YmxH family
NECEvent2014_4_7_scaffold_157_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8545..9354)
DNA (810bp) protein (270aa)
RNA polymerase sigma-G factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H429_9CLOT rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sigG; RNA polymerase sigma-G factor
NECEvent2014_4_7_scaffold_157_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9399..10112)
DNA (714bp) protein (238aa)
RNA polymerase sigma-E factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H368_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sigE; RNA polymerase sigma-E factor
NECEvent2014_4_7_scaffold_157_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10100..10906)
DNA (807bp) protein (269aa)
Sporulation sigma-E factor-processing peptidase {ECO:0000256|PIRNR:PIRNR018571}; EC=3.4.23.- {ECO:0000256|PIRNR:PIRNR018571};; Membrane-associated aspartic protease {ECO:0000256|PIRNR:PIRNR018571}; St
Sigma-E processing peptidase SpoIIGA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1T4_9CLOT
sporulation factor SpoIIGA family protein
NECEvent2014_4_7_scaffold_157_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11131..12252)
DNA (1122bp) protein (374aa)
Cell division protein FtsZ n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CJP0_9CLOT rbh
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
ftsZ; cell division protein FtsZ
NECEvent2014_4_7_scaffold_157_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12751..13809)
DNA (1059bp) protein (353aa)
Twitching motility protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGP7_9CLOT
Twitching motility protein {ECO:0000313|EMBL:EEH98219.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
twitching motility family protein
NECEvent2014_4_7_scaffold_157_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13907..14611)
DNA (705bp) protein (235aa)
RNA polymerase sigma-K factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HET3_9CLOT rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sigK; RNA polymerase sigma-28 factor SigK
NECEvent2014_4_7_scaffold_157_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14777..16393)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H433_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98221.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cell division protein FtsI/penicillin-binding protein 2
NECEvent2014_4_7_scaffold_157_18
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16455..17072)
DNA (618bp) protein (206aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CJL8_9CLOT rbh
NECEvent2014_4_7_scaffold_157_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17094..18329)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7Q8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98223.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
peptidase U32
NECEvent2014_4_7_scaffold_157_20
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18334..18978)
DNA (645bp) protein (215aa)
O-methyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDJ2_9CLOT
O-methyltransferase {ECO:0000313|EMBL:EOR27342.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
O-methyltransferase family protein
NECEvent2014_4_7_scaffold_157_21
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19012..20019)
DNA (1008bp) protein (336aa)
Aminodeoxychorismate lyase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDL9_9CLOT rbh
Aminodeoxychorismate lyase {ECO:0000313|EMBL:EOR27343.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;
aminodeoxychorismate lyase
NECEvent2014_4_7_scaffold_157_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20107..21933)
DNA (1827bp) protein (609aa)
GTP-binding protein TypA/BipA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H435_9CLOT rbh
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:EEH98226.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
typA; GTP-binding protein TypA/BipA
NECEvent2014_4_7_scaffold_157_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22084..23751)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H376_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98227.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
RNA-metabolising metallo-beta-lactamase family protein
NECEvent2014_4_7_scaffold_157_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23820..24290)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7R2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98228.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
FUR family transcriptional regulator
NECEvent2014_4_7_scaffold_157_25
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24333..24608)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR27347.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_4_7_scaffold_157_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24685..25101)
DNA (417bp) protein (139aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=457396 specie
putative holliday junction resolvase (EC:3.1.-.-)
Putative Holliday junction resolvase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEU1_9CLOT
NECEvent2014_4_7_scaffold_157_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25150..25407)
DNA (258bp) protein (86aa)
UPF0297 protein A500_05071 n=2 Tax=Clostridium RepID=R9CDD7_9CLOT
UPF0297 protein CSBG_01857 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_7_scaffold_157_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25548..28187)
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanine--tRNA ligase (EC:6.1.1.7)
Alanyl-tRNA synthetase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H378_9CLOT
NECEvent2014_4_7_scaffold_157_29
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28479..29510)
DNA (1032bp) protein (344aa)
Permease n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CJM7_9CLOT rbh
Permease {ECO:0000313|EMBL:EOR27351.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
permease
NECEvent2014_4_7_scaffold_157_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29462..29986)
DNA (525bp) protein (175aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98234.2}; Flags: Fragment;; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7
hypothetical protein
Displaying items 1-30 of 36 in total

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