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NECEvent2014_4_7_scaffold_392

Alias: 174_007_scaffold_392

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_392_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54..548)
DNA (495bp) protein (165aa)
dCMP deaminase (EC:3.5.4.12)
dCMP deaminase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAQ9_9CLOT rbh
dCMP deaminase {ECO:0000313|EMBL:EOR26343.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
NECEvent2014_4_7_scaffold_392_2
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

727..1491
DNA (765bp) protein (255aa)
biotin-(acetyl-CoA-carboxylase) ligase (EC:6.3.4.15)
Biotin-protein ligase/ Biotin operon repressor n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWX1_9CLOT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
NECEvent2014_4_7_scaffold_392_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1628..2422)
DNA (795bp) protein (265aa)
accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBA5_9CLOT
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
NECEvent2014_4_7_scaffold_392_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2422..3279)
DNA (858bp) protein (286aa)
accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGF2_9CLOT
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
NECEvent2014_4_7_scaffold_392_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3293..4636)
DNA (1344bp) protein (448aa)
accC1; Biotin carboxylase 1 (EC:6.3.4.14)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH99_9CLOT rbh
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:EEH98718.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_4_7_scaffold_392_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4652..5077)
DNA (426bp) protein (142aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFR3_9CLOT
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
NECEvent2014_4_7_scaffold_392_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5078..5569)
DNA (492bp) protein (164aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4J2_9CLOT
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EEH98720.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase
NECEvent2014_4_7_scaffold_392_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5571..6812)
DNA (1242bp) protein (414aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost
fabF; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
Beta-ketoacyl-acyl-carrier-protein synthase II n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3Q7_9CLOT rbh
NECEvent2014_4_7_scaffold_392_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6827..7570)
DNA (744bp) protein (248aa)
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H872_9CLOT rbh
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EEH98722.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
NECEvent2014_4_7_scaffold_392_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7560..8516)
DNA (957bp) protein (319aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHA1_9CLOT
malonyl CoA-acyl carrier protein transacylase
NECEvent2014_4_7_scaffold_392_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8530..9456)
DNA (927bp) protein (309aa)
Putative enoyl-(Acyl-carrier-protein) reductase II n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFR8_9CLOT
Putative enoyl-(Acyl-carrier-protein) reductase II {ECO:0000313|EMBL:EEH98724.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
putative enoyl-(acyl-carrier-protein) reductase II
NECEvent2014_4_7_scaffold_392_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9494..9715)
DNA (222bp) protein (74aa)
Acyl carrier protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4J3_9CLOT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridial
acpP_2; acyl carrier protein
NECEvent2014_4_7_scaffold_392_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9728..10705)
DNA (978bp) protein (326aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3Q9_9CLOT
3-oxoacyl-(acyl-carrier-protein) synthase III
NECEvent2014_4_7_scaffold_392_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10774..11406)
DNA (633bp) protein (211aa)
Biotin synthase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGG6_9CLOT
Biotin synthase {ECO:0000313|EMBL:EOR26301.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
bioY family protein
NECEvent2014_4_7_scaffold_392_15
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11508..12566
DNA (1059bp) protein (353aa)
Oxidoreductase, 2-nitropropane dioxygenase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAG5_9CLOT
Oxidoreductase, 2-nitropropane dioxygenase {ECO:0000313|EMBL:EOR26302.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sar
oxidoreductase, 2-nitropropane dioxygenase
NECEvent2014_4_7_scaffold_392_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12682..13554)
DNA (873bp) protein (291aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3APC5_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFC96332.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi
AraC family transcriptional regulator
NECEvent2014_4_7_scaffold_392_17
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13607..14755
DNA (1149bp) protein (383aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:00002
mannonate dehydratase (EC:4.2.1.8)
mannonate dehydratase n=1 Tax=Blautia producta RepID=UPI000373B333
NECEvent2014_4_7_scaffold_392_18
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14757..16367
DNA (1611bp) protein (537aa)
dioxygenase n=1 Tax=Blautia producta RepID=UPI000379C904
Uncharacterized protein {ECO:0000313|EMBL:EPD57412.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
D-mannonate oxidoreductase
NECEvent2014_4_7_scaffold_392_19
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16378..17781
DNA (1404bp) protein (468aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HA
D-glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RSM1_9FIRM
NECEvent2014_4_7_scaffold_392_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17880..18113
DNA (234bp) protein (78aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D003_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15778.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_7_scaffold_392_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18146..18262
DNA (117bp) protein (39aa)
Mechanosensitive ion channel family protein n=1 Tax=Clostridium perfringens F262 RepID=H7D002_CLOPF
mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EDT13617.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
Displaying 21 items

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