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NECEvent2014_4_7_scaffold_478

Alias: 174_007_scaffold_478

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_478_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..273)
DNA (273bp) protein (91aa)
Putative membrane protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSL2_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT15322.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
NECEvent2014_4_7_scaffold_478_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(330..1091)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4E4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99317.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_7_scaffold_478_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1231..2475
DNA (1245bp) protein (415aa)
yciB; putative L,D-transpeptidase YciB (EC:2.-.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H536_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99316.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_4_7_scaffold_478_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2577..3812)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2C3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY22159.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ErfK/YbiS/YcfS/YnhG family protein
NECEvent2014_4_7_scaffold_478_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3935..5284
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99315.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
poly A polymerase head domain protein
NECEvent2014_4_7_scaffold_478_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5317..9087)
DNA (3771bp) protein (1257aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {E
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAW1_9CLOT rbh
addA; helicase-exonuclease AddAB, AddA subunit
NECEvent2014_4_7_scaffold_478_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9091..12525)
DNA (3435bp) protein (1145aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044573}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044602};; EC=3.
Helicase-exonuclease AddAB, AddB subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8T7_9CLOT rbh
addB; helicase-exonuclease AddAB, AddB subunit
NECEvent2014_4_7_scaffold_478_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12569..13084)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4E3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99312.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
N-acetyltransferase GCN5
NECEvent2014_4_7_scaffold_478_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13244..14188)
DNA (945bp) protein (315aa)
Putative glucokinase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CB73_9CLOT rbh
Putative glucokinase {ECO:0000313|EMBL:EOR26518.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
glucokinase
NECEvent2014_4_7_scaffold_478_trna_3
unknown

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comp(14345..14432)
DNA (88bp)
transferRNA
NECEvent2014_4_7_scaffold_478_trna_2
unknown

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comp(14460..14547)
DNA (88bp)
transferRNA
NECEvent2014_4_7_scaffold_478_trna_1
unknown

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comp(14688..14775)
DNA (88bp)
transferRNA
Displaying 12 items

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