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NECEvent2014_4_7_scaffold_399_8

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: 5710..6483

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 259.0
  • Bit_score: 426
  • Evalue 2.00e-116
Pseudouridine synthase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFD7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 259.0
  • Bit_score: 426
  • Evalue 1.40e-116
  • rbh
pseudouridine synthase family protein similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 255.0
  • Bit_score: 378
  • Evalue 2.10e-102

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Taxonomy

Clostridium sartagoforme → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 774
ATGAATCAAAAGAATAAGGAATACATAATTGTACATAAAGAAAGAGGATCACAAGTTAGGCTTAATAAGTTTATAAGTGAAACTGGATATTGTTCAAGAAGAGAAGCTGATAAGCTTATAGAAGATGGAAGAGTAACTATTGATGGCATAAAGGCTGTAATGGGAATGAAGGTAAATTTAGATGCTAATGTAAAAGTTGATGGAAAGCCTTTAAAAAAAGAAGAAAAATTAGTTTATATAGCTTTAAATAAACCAGTTGGAATAACCTGCACTACAGAGAAAAAAGTAAGGGGTAATATAGTTGATTTTGTAAATCATGAAAAAAGAATTTTTCCTATAGGTAGATTAGATAAAGATTCACAGGGGTTAATTTTATTAACTAATGATGGTGATATAGTAAATAAAATATTAAGAGCTGGAAATAATCATGAAAAAGAATATATAGTAACTGTGAATAGACCTATAGATGATAAATTTATAGAGTCTATGTCTAGTGGGGTTAGAATATTAGGAACTATAACAAAGAAATGTATAGTTAATAAAATTAATGAGAGAACCTTTAGAATTATACTAACTCAAGGAATGAATAGGCAAATAAGAAGAATGTGTGAAGCTTTAGGTTATAATGTAACTAAACTAAATAGAATAAGGATAATGAACATAAACTTAGGTAATTTAAAGATAGGTAGTTGGAGAAATTTATCCTCAGAAGAACTTAGAAAATTAAACTCATTAATAAGTACTTCTGTAAAAACTAAAGAAGCTGATGAATAA
PROTEIN sequence
Length: 258
MNQKNKEYIIVHKERGSQVRLNKFISETGYCSRREADKLIEDGRVTIDGIKAVMGMKVNLDANVKVDGKPLKKEEKLVYIALNKPVGITCTTEKKVRGNIVDFVNHEKRIFPIGRLDKDSQGLILLTNDGDIVNKILRAGNNHEKEYIVTVNRPIDDKFIESMSSGVRILGTITKKCIVNKINERTFRIILTQGMNRQIRRMCEALGYNVTKLNRIRIMNINLGNLKIGSWRNLSSEELRKLNSLISTSVKTKEADE*