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NECEvent2014_4_7_scaffold_399

Alias: 174_007_scaffold_399

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_399_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(82..492)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Q5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96544.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_7_scaffold_399_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

817..1413
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6A8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96545.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_7_scaffold_399_trna_1
unknown

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1479..1549
DNA (71bp)
transferRNA
NECEvent2014_4_7_scaffold_399_trna_2
unknown

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1558..1630
DNA (73bp)
transferRNA
NECEvent2014_4_7_scaffold_399_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1703..2980
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96546.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Na+/H+ antiporter
NECEvent2014_4_7_scaffold_399_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3227..3718)
DNA (492bp) protein (164aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HBZ0_9CLOT
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
NECEvent2014_4_7_scaffold_399_5
unknown

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comp(3813..4004)
DNA (192bp) protein (64aa)

This feature has no annotations

NECEvent2014_4_7_scaffold_399_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4093..4683
DNA (591bp) protein (197aa)
Sortase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H295_9CLOT
Sortase {ECO:0000313|EMBL:EEH96548.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sortase family protein
NECEvent2014_4_7_scaffold_399_7
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4704..5699
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CF60_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR27989.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
anti-sigma factor family protein
NECEvent2014_4_7_scaffold_399_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5710..6483
DNA (774bp) protein (258aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
Pseudouridine synthase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFD7_9CLOT rbh
pseudouridine synthase family protein
NECEvent2014_4_7_scaffold_399_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6808..7563
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96551.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_7_scaffold_399_10
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7646..10309)
DNA (2664bp) protein (888aa)
Cation-transporting ATPase, P-type n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CLE3_9CLOT rbh
Cation-transporting ATPase, P-type {ECO:0000313|EMBL:EOR27986.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoform
ATPase, P-type (transporting), HAD superfamily, subfamily IC
NECEvent2014_4_7_scaffold_399_11
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10663..11448)
DNA (786bp) protein (262aa)
Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M3A1_CLOB8 rbh
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:AJH02101.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijer
helix-turn-helix domain-containing protein
NECEvent2014_4_7_scaffold_399_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11756..13885
DNA (2130bp) protein (710aa)
Glycoside hydrolase, family 3 domain protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M3A0_CLOB8 rbh
Glycoside hydrolase family 3 protein {ECO:0000313|EMBL:AJH02100.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii
glycoside hydrolase family protein
NECEvent2014_4_7_scaffold_399_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14288..15781
DNA (1494bp) protein (498aa)
D-ribose transporter ATP binding protein n=1 Tax=Clostridium beijerinckii RepID=UPI00031C6B5E rbh
ABC transporter related {ECO:0000313|EMBL:AJH02094.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium
ABC transporter related protein rbh
NECEvent2014_4_7_scaffold_399_14
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15783..16787
DNA (1005bp) protein (335aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7LX84_9CLOT rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EHI96746.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
monosaccharide-transporting ATPase rbh
NECEvent2014_4_7_scaffold_399_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16850..17878
DNA (1029bp) protein (343aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MUY6_CLOSA rbh
ABC-type sugar transport system, periplasmic component rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:AGX44604.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
Displaying 17 items

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