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NECEvent2014_4_7_scaffold_408_11

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: comp(12489..13751)

Top 3 Functional Annotations

Value Algorithm Source
Type I restriction modification DNA specificity domain protein n=1 Tax=Clostridium difficile CD3 RepID=T2TA97_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 462.0
  • Bit_score: 280
  • Evalue 2.00e-72
Putative type I restriction-modification system {ECO:0000313|EMBL:CCZ94184.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental sampl similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 234.0
  • Bit_score: 309
  • Evalue 9.90e-81
type I restriction modification DNA specificity domain protein similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 444.0
  • Bit_score: 263
  • Evalue 9.60e-68

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Taxonomy

Coprococcus eutactus CAG:665 → Coprococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1263
ATGAGTAGGAAGATGAAGGATAGTGGAGTTGAATGGATTGGCAAAATTCCTGAGACGTGGAAAATATCTAAGGTAAAAAGAGGATTCATAAGAAAAAATACTAAAGCTATGATTGACAATCCAACAATTTTATCTTTAACTTCTAGAGGAGTGAAGATTAGAGATATAACTAATAACGAAGGTCAAATTGCTGAAAGTTATTATAATTATAATCCGGTTTCAATTGGAGACCTACTATTAAATCCTATGGACTTAGTTAGTAATGCATTTTCTAGTGTATCTGAAATTGAAGGCGTTATAAGCCCTGCATATGTAAATATAAAGGCACTGAATAAATATTATGTCAAATATTATGATTATTATTTTAAGTTACAATATTGGGGATTATCATTCTTTGCACATGGTAAAGGAGTTTCATATGAAAATAGATGGACTCTTAATAATGAGACTTTAATGAATTATCCTATTCCTTATCCAGTAGAAGAGGAACAAATTTTGATATCTAATTATCTTGATAAGAAAGTATTTCAAATTGATAATATTATTTCAAAGCAAAAAAGCCTTATTGAAAAATATAAAGCTTATAAGCAAAGTCTTATTACAGAAACAGTAACAAAAGGATTAAATAAAAATGTTCCTATGAAGGATAGTGGAATAGAGTGGATTGGAGAAATACCAAGTCATTGGGAAATTAGAAAAGTTAAAAATGGATTTATACGTAAACTTTCAAAAGCTATGGCAGATAATCCAACTATATTATCTTTGACAGCTAGTGGGGTAAAGGTTAGAGATATCACAAATAATCAAGGGCAGATAGCAGAGAGTTATTACAACTATAATCCAGTTTCAATTGGAGATTTATTGCTAAATCCTATGGATTTGGTTAGTAATGCATTCTCAAGCATATCCCAAATAGAGGGGGTAATAAGTCCAGCATATATTAATTTGAAAAATTTAAAAGGATATAATTCTAATTATTATGATTATTATTTCAAATTACAGTATTGGGGATTAACTTTTTTTGCTCATGGTAAAGGAGTTTCATATGAAAATAGATGGACACTTAATAATGAGACACTAATGAATTATATTATTCCTTATCCACCTGAAAAAGAACAAAGAGATATTGCTCTATATTTAAATAATAAATGCAATAAAATAGATAGAGTAGTTGAAAAAAAAGAAAAAATTATTGAATATTTACAAGAATATAAAAAATCATTAATTTATGAATGTGTTACTGGTAAAAGAGAGGTGAATTAG
PROTEIN sequence
Length: 421
MSRKMKDSGVEWIGKIPETWKISKVKRGFIRKNTKAMIDNPTILSLTSRGVKIRDITNNEGQIAESYYNYNPVSIGDLLLNPMDLVSNAFSSVSEIEGVISPAYVNIKALNKYYVKYYDYYFKLQYWGLSFFAHGKGVSYENRWTLNNETLMNYPIPYPVEEEQILISNYLDKKVFQIDNIISKQKSLIEKYKAYKQSLITETVTKGLNKNVPMKDSGIEWIGEIPSHWEIRKVKNGFIRKLSKAMADNPTILSLTASGVKVRDITNNQGQIAESYYNYNPVSIGDLLLNPMDLVSNAFSSISQIEGVISPAYINLKNLKGYNSNYYDYYFKLQYWGLTFFAHGKGVSYENRWTLNNETLMNYIIPYPPEKEQRDIALYLNNKCNKIDRVVEKKEKIIEYLQEYKKSLIYECVTGKREVN*