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NECEvent2014_4_7_scaffold_408

Alias: 174_007_scaffold_408

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_408_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..149)
DNA (147bp) protein (49aa)
Putative Transposase {ECO:0000313|EMBL:BAQ12883.1}; Putative transposase {ECO:0000313|EMBL:BAP25834.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
hypothetical protein
NECEvent2014_4_7_scaffold_408_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(136..1668)
DNA (1533bp) protein (511aa)
Phage integrase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VPJ9_9FIRM
Phage integrase {ECO:0000313|EMBL:AIW54703.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
phage integrase family protein
NECEvent2014_4_7_scaffold_408_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1655..3079)
DNA (1425bp) protein (475aa)
Phage integrase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJN6_9FIRM
Putative tyrosine recombinase/integrase family protein {ECO:0000313|EMBL:BAP25832.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
phage integrase family protein
NECEvent2014_4_7_scaffold_408_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3069..3806)
DNA (738bp) protein (246aa)
Phage integrase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJN7_9FIRM
Integrase {ECO:0000313|EMBL:AIW54701.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
phage integrase family protein
NECEvent2014_4_7_scaffold_408_5
unknown

Not on your lists

comp(3949..4038)
DNA (90bp) protein (30aa)

This feature has no annotations

NECEvent2014_4_7_scaffold_408_6
Clostridium sp. CAG:710, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4248..4592)
DNA (345bp) protein (115aa)
Putative transcriptional regulator MerR family n=1 Tax=Clostridium sp. CAG:710 RepID=R5T9V0_9CLOT
Putative transcriptional regulator MerR family {ECO:0000313|EMBL:CCZ59979.1}; TaxID=1262833 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples
hypothetical protein
NECEvent2014_4_7_scaffold_408_7
Streptomyces pratensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4798..5700
DNA (903bp) protein (301aa)
ADP-ribosylation/Crystallin J1 n=1 Tax=Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD) RepID=E8W0M4_STRFA
ADP-ribosylation/Crystallin J1
ADP-ribosylation/Crystallin J1 {ECO:0000313|EMBL:ADW06239.1}; TaxID=591167 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pratensis (strai
NECEvent2014_4_7_scaffold_408_8
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5841..6908)
DNA (1068bp) protein (356aa)
5-methylcytosine-specific restriction enzyme subunit McrC family protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PS55_9FIRM rbh
5-methylcytosine-specific restriction enzyme subunit McrC family protein {ECO:0000313|EMBL:ERK46936.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacter
5-methylcytosine restriction system component-like protein
NECEvent2014_4_7_scaffold_408_9
Scardovia inopinata, Scardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6901..9294)
DNA (2394bp) protein (798aa)
restriction endonuclease n=1 Tax=Scardovia inopinata RepID=UPI0001D09695 rbh
Putative ATPase {ECO:0000313|EMBL:BAR06395.1}; TaxID=1150468 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Scardovia.;" source="Scardovia inopinata JCM 12537.;"
5-methylcytosine-specific restriction enzyme B
NECEvent2014_4_7_scaffold_408_10
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9435..12488)
DNA (3054bp) protein (1018aa)
type I restriction endonuclease subunit R n=1 Tax=Clostridium arbusti RepID=UPI0002899A58 rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS71467.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
type III restriction protein res subunit rbh
NECEvent2014_4_7_scaffold_408_11
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12489..13751)
DNA (1263bp) protein (421aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Clostridium difficile CD3 RepID=T2TA97_CLODI
Putative type I restriction-modification system {ECO:0000313|EMBL:CCZ94184.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental sampl
type I restriction modification DNA specificity domain protein
NECEvent2014_4_7_scaffold_408_12
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13744..15549)
DNA (1806bp) protein (602aa)
type I restriction endonuclease subunit M n=1 Tax=Clostridium arbusti RepID=UPI00028923DC rbh
Uncharacterized protein {ECO:0000313|EMBL:EOQ01911.1}; TaxID=1053235 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD140.;
N-6 DNA methylase
NECEvent2014_4_7_scaffold_408_13
Clostridium haemolyticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15684..15905)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KDF2_CLOPA
Seryl-tRNA synthetase {ECO:0000313|EMBL:KGN04517.1}; TaxID=1443115 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium haemolyticum NCTC 8350.;
hypothetical protein
NECEvent2014_4_7_scaffold_408_14
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16193..16375)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B3F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG92232.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
NECEvent2014_4_7_scaffold_408_15
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16368..16709)
DNA (342bp) protein (114aa)
Acetyltransferase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMV7_9FIRM
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGL02907.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.
NECEvent2014_4_7_scaffold_408_16
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17151..18830)
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B4B4FE
Uncharacterized protein {ECO:0000313|EMBL:EPD80036.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
NERD domain-containing protein
NECEvent2014_4_7_scaffold_408_17
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19044..19517)
DNA (474bp) protein (158aa)
N-acetyltransferase GCN5 n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EFK3_CLOPA
acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERI92371.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
NECEvent2014_4_7_scaffold_408_18
[Ruminococcus] obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19664..19933)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZNW7_9FIRM
NECEvent2014_4_7_scaffold_408_19
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20098..21129
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BSS8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR20194.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_4_7_scaffold_408_20
unknown

Not on your lists

21266..21334
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 20 items

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