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NECEvent2014_4_7_scaffold_1309_1

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: comp(1..309)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=2 Tax=Clostridium RepID=R9CL79_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 103.0
  • Bit_score: 208
  • Evalue 2.40e-51
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 103.0
  • Bit_score: 208
  • Evalue 3.40e-51
rpsL; 30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 103.0
  • Bit_score: 200
  • Evalue 3.20e-49

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 309
ATGCCAACTATTAGCCAATTAGTAAGAAAAGGCAGAAAAACTGTTATCAACAAGTCAACAGCACCAGCACTTAATGAGTGTCCACAAAGAAGAGGGGTTTGTACAGTTGTTAAAACAACTACTCCTAAGAAGCCTAACTCAGCGTTAAGAAAAATTGCGAGAGTAAGACTTACAAATGGATTCGAAGTAACTGCATACATTGGTGGTGTAGGACACAACTTACAAGAGCACAGCGTTGTTCTTATAAGAGGTGGTAGAGTTAAGGACCTTCCTGGTGTTAGATACCATATCGTAAGAGGAGCACTTGAT
PROTEIN sequence
Length: 103
MPTISQLVRKGRKTVINKSTAPALNECPQRRGVCTVVKTTTPKKPNSALRKIARVRLTNGFEVTAYIGGVGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALD