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NECEvent2014_4_7_scaffold_1309_3

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: comp(4212..4997)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 261.0
  • Bit_score: 514
  • Evalue 1.30e-142
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 264.0
  • Bit_score: 436
  • Evalue 5.10e-120
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEZ2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 261.0
  • Bit_score: 514
  • Evalue 8.90e-143

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Taxonomy

Clostridium sartagoforme → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 786
GTTCCATCTCGTATGAACATCGGTCAGGTACTAGAAGTTCACTTAGGATGGGCAGCAAGTCAATTAGGATGGCATATAGCTACTCCTGTATTTGATGGAGCAACTGAAAAAGATATAGAAGAATGCTTAGAAAAAGCAGGATATAATGCGAATGGGAAAACTGTTTTATATGATGGTAGAACAGGAGAAGCTTTCGATAATGAAGTAACTGTTGGTATAATGTATATCTTAAAACTAGCTCACTTAGTTGATGATAAGATACACGCAAGATCTACAGGACCATATTCATTAGTAACTCAACAGCCTCTTGGTGGTAAGGCACAATTTGGTGGTCAAAGATTCGGAGAAATGGAAGTTTGGGCATTAGAAGCATATGGTGCTGCACATACACTACAAGAAATATTAACTGTTAAATCAGATGATGTTGTAGGTAGAGTTAAAACTTATGAAGCTATAGTTAAGGGTGAAAATATTCCTGAACCAGGAGTTCCAGAATCATTTAAGGTTCTTATAAAAGAACTTCAAGCTTTATGTTTAGATGTTAAAGTTTTAAACGGAGATAACCAAGAAGTAAAACTTAAAGAGTTTGCTGAAGAAGATATGGAAGATTTAGAGGTTAACATTGAAGGAACAGAAGATGTTGTTTCTGATGATGTGAATATAGATGATAGTTATACAATGCTAGAGGAAGAAGTTGAGGAAGAAGTAGAGTTTGATAACTTTGCATTAGAAGGCTTCCATGAAGAAGACTTAGAACTTGATGATTTTGTAAATGATGAACACTAA
PROTEIN sequence
Length: 262
VPSRMNIGQVLEVHLGWAASQLGWHIATPVFDGATEKDIEECLEKAGYNANGKTVLYDGRTGEAFDNEVTVGIMYILKLAHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGVPESFKVLIKELQALCLDVKVLNGDNQEVKLKEFAEEDMEDLEVNIEGTEDVVSDDVNIDDSYTMLEEEVEEEVEFDNFALEGFHEEDLELDDFVNDEH*