ggKbase home page

NECEvent2014_5_1_scaffold_47_17

Organism: NECEvent2014_5_1_Clostridium_paraputrificum_30_65

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(20212..20517)

Top 3 Functional Annotations

Value Algorithm Source
TrpR like protein, YerC/YecD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5ML31_CLOSA similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 100.0
  • Bit_score: 163
  • Evalue 1.50e-37
TrpR like protein, YerC/YecD similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 100.0
  • Bit_score: 163
  • Evalue 4.20e-38
TrpR-like protein YerC/YecD {ECO:0000313|EMBL:ENZ00709.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 100.0
  • Bit_score: 163
  • Evalue 2.10e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium colicanis → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 306
ATGAGTGAGATAAACTCAAAGATAAAAAGTAAAGAGATGGATTTGTTTTTTGAAGCTATACTCAAACTTGAAAATTTAGAAGAGTGTTATAATTTTTTTGAGGATGTTGCAACCATAAATGAAGTAAAATCCTTAGCACAAAGAATGCATGTGGCTAAGCTGTTAAATGAAAAAAAGACATATACAGAGATAGTTGAAATAACAGGAGCAAGTACTGCTACTATAAGTAGGGTAAATAGATGTTTAAATTATGGTAGCGATGGCTATAGTTTATTACTTGAAAGAATAAGAAAAGACGAGGAATAG
PROTEIN sequence
Length: 102
MSEINSKIKSKEMDLFFEAILKLENLEECYNFFEDVATINEVKSLAQRMHVAKLLNEKKTYTEIVEITGASTATISRVNRCLNYGSDGYSLLLERIRKDEE*