ggKbase home page

NECEvent2014_5_1_scaffold_47_18

Organism: NECEvent2014_5_1_Clostridium_paraputrificum_30_65

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(20606..21436)

Top 3 Functional Annotations

Value Algorithm Source
HTH DNA-binding protein n=2 Tax=Clostridium botulinum B RepID=B2TIN5_CLOBB similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 276.0
  • Bit_score: 395
  • Evalue 4.90e-107
  • rbh
HTH DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 276.0
  • Bit_score: 395
  • Evalue 1.40e-107
HTH DNA-binding protein {ECO:0000313|EMBL:ACD24168.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 276.0
  • Bit_score: 395
  • Evalue 6.90e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 831
ATGAGAACATCTATGAATATTCAAAACAAATTGACTATGTTATCAGAGATGAGAAATGATTCGAAGTTTCAGATTTTAGAATTTGATCGTTTAGAAGGAGCAACAGATGTTGGAACAGCTCTTGGATTACAAATAATGAATGACAGTGGAATAAAGCTGAGACAAGTTAGAATTATTCTTGAGGATAGTTCAGTAAAGCTTGAATCAGGCGCGTTAAGTTATATGAAGGGTGAAATAGAAATAAAGACTAAAACAGGTGGAGTAGTTGGATTAGGGAAAAAGTTTTTAAATAGTAAGTTGACAGGTGAAACTATGTTTAAACCAACCTATGAAGGAACAGGTGAAATATTTTTAGAGCCGTCATTTGGACATTTTGCCTTAATAGAATTAGAAGATGAAGAAATTATAGTTGATGATGGATTGTTTTATGCTTGTGAAGAAGATGTTGAAGTTGGGGCAGCCATGCAAAAAAGTGTTTCTTCAATGTTATTCGGAAATGAAGGAATATATCAAACAAGTATTTCTGGAAGTGGAATAGTTGTATTAGAGATTCCTGTACCGGAGTCAGAAATTTTTAAATGTAAATTATTTAATGATACCTTAAAGGTAGATGGTAATTTTGCTGTATTAAGAACTAGTAATATTAAGTTTACTGTAGAAAAATCATCTTCTTTAATAGGAAGTGTTACTAATGGTGAAGGGTTATTAAATGTATATAGTGGAACAGGAGAGGTATGGTTATTACCAACGATGAGTATTTATCAAGATTTAAGGTTAGAAGGATTAAACTCTTTAGCTAATCCAGAGGGCAGTAGGAATACAGAAGTATAA
PROTEIN sequence
Length: 277
MRTSMNIQNKLTMLSEMRNDSKFQILEFDRLEGATDVGTALGLQIMNDSGIKLRQVRIILEDSSVKLESGALSYMKGEIEIKTKTGGVVGLGKKFLNSKLTGETMFKPTYEGTGEIFLEPSFGHFALIELEDEEIIVDDGLFYACEEDVEVGAAMQKSVSSMLFGNEGIYQTSISGSGIVVLEIPVPESEIFKCKLFNDTLKVDGNFAVLRTSNIKFTVEKSSSLIGSVTNGEGLLNVYSGTGEVWLLPTMSIYQDLRLEGLNSLANPEGSRNTEV*