ggKbase home page

NECEvent2014_5_1_scaffold_47_50

Organism: NECEvent2014_5_1_Clostridium_paraputrificum_30_65

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(52758..53378)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FQF3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 206.0
  • Bit_score: 393
  • Evalue 1.40e-106
  • rbh
rpsD; ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 206.0
  • Bit_score: 394
  • Evalue 2.30e-107
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sull similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 206.0
  • Bit_score: 394
  • Evalue 1.10e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 621
ATGGCAAGATATACTGGAGCTACATGTAGATTATGTAGAAGAGAAGGTATGAAACTGTTCCTTAAAGGGGATAGATGTTATACAGATAAATGCGCTTTTGCAAGAAGAAGCTATGCGCCAGGACAACATGGAGCTAGCAAGAAGAAGTTATCAAACTACGGAATTCAATTAAGAGAAAAGCAAAAAGCTAAGAGAATATACGGAGTTTTAGAAAGCCAATTCAGAAATTACTATGAAAAGGCTGAACACATAAAAGGAATTACTGGTGAAAACTTATTAAAGTTATTAGAATTAAGACTTGATAACGTAGCATATAGATTAGGATATGGTGCATCAAGAAATGAAGCTAGACAACTAGTAACTCATGGACATTTCTTAGTAAATGGAAAGAAAGTAGATATTCCATCATACAAAGTTTGTGTAAATGATGTAATAACTGTTTGTGAAAAGAGTAGAGGAAGCGAAAAGTTCAAGACTTTCGTTGAAAATCCAAAGACTTTACCAAAATGGTTAGAAGCAAATATCGAAAACTACGAAGGCAAAGTAGTTGCTGAACCAACAAGAGAAGATATTGACGTTCCTGTTAATGAAACGCTTATCGTCGAGTTATACAGCAAGTAG
PROTEIN sequence
Length: 207
MARYTGATCRLCRREGMKLFLKGDRCYTDKCAFARRSYAPGQHGASKKKLSNYGIQLREKQKAKRIYGVLESQFRNYYEKAEHIKGITGENLLKLLELRLDNVAYRLGYGASRNEARQLVTHGHFLVNGKKVDIPSYKVCVNDVITVCEKSRGSEKFKTFVENPKTLPKWLEANIENYEGKVVAEPTREDIDVPVNETLIVELYSK*