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NECEvent2014_5_1_scaffold_50_2

Organism: NECEvent2014_5_1_Clostridium_paraputrificum_30_65

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: 978..1643

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Clostridium tunisiense RepID=UPI00031A8B2C similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 221.0
  • Bit_score: 319
  • Evalue 3.60e-84
  • rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:KGK88322.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27 similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 221.0
  • Bit_score: 323
  • Evalue 2.70e-85
DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 222.0
  • Bit_score: 307
  • Evalue 2.30e-81

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Taxonomy

Clostridium sp. HMP27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 666
ATGCAAAAGATTATTATTGTTGAGGATACAGAGAAGATTAGAAATGAGTTGAAAGAGTTCTTAAGTAAATACGGCTATGATGTTAAAGTGCCCAAAGATTTTAAAAATATAATTAATTACATTTTTGAGGAAAATCCAGATTTAATATTGTTAGATATTAATCTACCTGTTTTTGATGGATATTATATTTGTAGAGAGATTAGAAGTAAGTCAGATGTACCTATTATTATTGTAACAAGTAGAGATAGTGAGATGGATGAGTTGATGAGTATGAACCTAGGTGCGGATGATTTTATAACTAAGCCATATAATACTCAAATCTTATTAGCTAGGATAAGTTCTATATTAAGAAGAGTTAATAGTTCATCATCTCAATTATTAATGCATAATGGACTTAATCTAAATTTATCTAGTGGGAGTATATCTTACAACAATAATATATCAGAGCTTACCAAGAATGAACTGAAAATATTAAATTATTTAATATTAAATAAGGAAAAGATAGTATCAAGAGATGAACTAATGGAGTATTTATGGTCTTCAGAAGCATATGTAGATGATAATACTCTTTCGGTAAATGTAACTAGGCTAAGAAAGAAGTTAGAGGAAATAGGGTTGAAGAATGTTATAGAAACTAGGAGAGGATTAGGTTATATATTAATATGA
PROTEIN sequence
Length: 222
MQKIIIVEDTEKIRNELKEFLSKYGYDVKVPKDFKNIINYIFEENPDLILLDINLPVFDGYYICREIRSKSDVPIIIVTSRDSEMDELMSMNLGADDFITKPYNTQILLARISSILRRVNSSSSQLLMHNGLNLNLSSGSISYNNNISELTKNELKILNYLILNKEKIVSRDELMEYLWSSEAYVDDNTLSVNVTRLRKKLEEIGLKNVIETRRGLGYILI*