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NECEvent2014_5_1_scaffold_50

Alias: 175_007_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_1_scaffold_50_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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250..942
DNA (693bp) protein (231aa)
Putative metal-dependent phosphoesterase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C5B7_9CLOT rbh
Putative metal-dependent phosphoesterase {ECO:0000313|EMBL:EOR24473.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sarta
putative metal-dependent phosphoesterase
NECEvent2014_5_1_scaffold_50_2
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

978..1643
DNA (666bp) protein (222aa)
XRE family transcriptional regulator n=1 Tax=Clostridium tunisiense RepID=UPI00031A8B2C rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:KGK88322.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27
DNA-binding response regulator
NECEvent2014_5_1_scaffold_50_3
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1640..2653
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
Sensor histidine kinase n=1 Tax=Clostridium sp. BL8 RepID=T0PQ74_9CLOT rbh
integral membrane sensor signal transduction histidine kinase
NECEvent2014_5_1_scaffold_50_4
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2743..3534
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3W9_9CLOT rbh
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEZ85052.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
ABC transporter
NECEvent2014_5_1_scaffold_50_5
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3524..5539
DNA (2016bp) protein (672aa)
hypothetical protein n=1 Tax=Bacillus sp. AP8 RepID=UPI00031CFF24 rbh
ABC transporter {ECO:0000313|EMBL:KEZ85053.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
ABC transporter
NECEvent2014_5_1_scaffold_50_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5593..8241)
DNA (2649bp) protein (883aa)
Putative ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F6C9_9CLOT rbh
HAD ATPase, P-type, IC family protein
Putative ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:CDG00588.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
NECEvent2014_5_1_scaffold_50_7
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8556..8819
DNA (264bp) protein (88aa)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TKV4_9CLOT
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:EKQ52285.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Ma
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
NECEvent2014_5_1_scaffold_50_8
Vibrio alginolyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9172..10092
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Vibrio alginolyticus NBRC 15630 = ATCC 17749 RepID=T2BUH6_VIBAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGV16744.1}; TaxID=1219076 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio alginolyticus NBRC 1563
NECEvent2014_5_1_scaffold_50_9

Not on your lists

10128..11828
DNA (1701bp) protein (567aa)
Putative uncharacterized protein C1_0073 n=2 Tax=uncultured archaeon RepID=Q2Y4M3_9ARCH rbh
Putative uncharacterized protein C1_0073 {ECO:0000313|EMBL:CAI64105.1}; Putative uncharacterized protein C3_0017 {ECO:0000313|EMBL:CAI64242.1}; TaxID=115547 species="Archaea; environmental samples.;"
hypothetical protein
NECEvent2014_5_1_scaffold_50_10
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12163..12639)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR27982.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
NECEvent2014_5_1_scaffold_50_11
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12780..14633)
DNA (1854bp) protein (618aa)
DNA primase catalytic core domain-containing protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DEK9_CLOTH rbh
CHC2-type zinc finger protein
DNA primase catalytic core domain-containing protein {ECO:0000313|EMBL:ABN52388.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source=
NECEvent2014_5_1_scaffold_50_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15088..16611
DNA (1524bp) protein (508aa)
adenine-specific methylase (EC:2.1.1.72)
Type I restriction system adenine methylase HsdM n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CLN4_9CLOT rbh
Type I restriction system adenine methylase HsdM {ECO:0000313|EMBL:EOR28091.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
NECEvent2014_5_1_scaffold_50_13
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16763..18025
DNA (1263bp) protein (421aa)
Type-1 restriction enzyme MjaXIP specificity protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTR9_CLOSA
Restriction endonuclease S subunit {ECO:0000313|EMBL:CEQ15096.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium so
type-1 restriction enzyme MjaXIP specificity protein
NECEvent2014_5_1_scaffold_50_14
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18044..18958
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002EC886F rbh
Uncharacterized conserved protein {ECO:0000313|EMBL:CEP95524.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sor
hypothetical protein
NECEvent2014_5_1_scaffold_50_15
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18979..20820
DNA (1842bp) protein (614aa)
ATP-dependent OLD family endonuclease n=1 Tax=Geobacillus sp. (strain WCH70) RepID=C5DA37_GEOSW rbh
SMC domain-containing protein {ECO:0000313|EMBL:CEP92066.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordell
ATP-dependent OLD family endonuclease rbh
NECEvent2014_5_1_scaffold_50_16
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20931..24107
DNA (3177bp) protein (1059aa)
putative type-1 restriction enzyme MjaXP R protein (EC:3.1.21.3)
Type I restriction-modification system, R subunit n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGB9_9CLOT rbh
Type I restriction-modification system, R subunit {ECO:0000313|EMBL:EOR28085.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_5_1_scaffold_50_17
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24117..24830
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6LL71_9CLOT
Putative metal-dependent hydrolase {ECO:0000313|EMBL:CEQ03466.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium so
putative metal-dependent hydrolase
NECEvent2014_5_1_scaffold_50_18
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24871..25599)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFF5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR28084.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
NECEvent2014_5_1_scaffold_50_19
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25819..26598
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFM3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR28083.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
NECEvent2014_5_1_scaffold_50_20
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26848..27765
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFK9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR28082.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_5_1_scaffold_50_21
unknown

Not on your lists

28398..28538
DNA (141bp) protein (47aa)

This feature has no annotations

NECEvent2014_5_1_scaffold_50_22
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28551..30128
DNA (1578bp) protein (526aa)
Site-specific recombinase, resolvase family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGB5_9CLOT rbh
Site-specific recombinase, resolvase family protein {ECO:0000313|EMBL:EOR28080.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
pin; site-specific recombinase, DNA invertase Pin
NECEvent2014_5_1_scaffold_50_23
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30283..30474
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFF0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR28079.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
NECEvent2014_5_1_scaffold_50_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30471..32021
DNA (1551bp) protein (517aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFM0_9CLOT rbh
Site-specific recombinase, DNA invertase Pin {ECO:0000313|EMBL:EOR28078.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
pin; site-specific recombinase, DNA invertase Pin
NECEvent2014_5_1_scaffold_50_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32309..33061
DNA (753bp) protein (251aa)
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UYY4_CLOBA rbh
putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KIL08661.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum
NECEvent2014_5_1_scaffold_50_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33212..33571
DNA (360bp) protein (120aa)
Putative transcriptional repressor SmtB n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKR9_9CLOT
Putative transcriptional repressor SmtB {ECO:0000313|EMBL:EKY28594.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum
cadmium efflux system accessory protein
NECEvent2014_5_1_scaffold_50_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33588..35765
DNA (2178bp) protein (726aa)
cadA; cadmium-translocating P-type ATPase (EC:3.6.3.3)
Heavy metal translocating P-type ATPase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6B6_9CLOT rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EEH96560.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2
NECEvent2014_5_1_scaffold_50_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36113..36673
DNA (561bp) protein (187aa)
Putative manganese efflux pump MntP 2 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKV8_CLOSA
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
mntP1; putative manganese efflux pump MntP 2
NECEvent2014_5_1_scaffold_50_29
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36862..37494
DNA (633bp) protein (211aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Clostridium intestinale URNW RepID=U2NT49_9CLOT rbh
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
oxidoreductase , NAD-binding Rossmann fold family protein
NECEvent2014_5_1_scaffold_50_30
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37784..38569
DNA (786bp) protein (262aa)
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:EOR28062.1}; EC=4.2.1.55 {ECO:0000313|EMBL:EOR28062.1};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
crt; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFJ0_9CLOT rbh
Displaying items 1-30 of 51 in total

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