ggKbase home page

NECEvent2014_5_1_scaffold_229_18

Organism: NECEvent2014_5_1_Clostridium_paraputrificum_30_65

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: 15861..16439

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Clostridium intestinale URNW RepID=U2N3T2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 192.0
  • Bit_score: 254
  • Evalue 7.20e-65
DNA-binding protein {ECO:0000313|EMBL:CEN71961.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 190.0
  • Bit_score: 261
  • Evalue 8.20e-67
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 192.0
  • Bit_score: 223
  • Evalue 5.00e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAGATTGGAAAACAAATAAGAAAATATAGAACAGAGATGGAGCTTTCACAGGATGAACTAGCTGAAAAGATTTTTGTATCTCGTCAAACTATTTCAAATTGGGAAAACAATAAGAACTACCCTGATGTGAAAAGCTTATTATTGCTAAGCTCTCTTTTTAGTGTATCTCTTGACAGATTAGTTAAAGGAGACCTTGAAGAAATGAAGGAAAAAATTAAATCAGAAGACATTAAGGAATTTAACCATCTAAGTAGCATCTTTGCTGTGTTATTATTAGCAACTATTTTATTACCTGTTCCACTTGTACACTTTTTTGGGAAGATTGGAATGGGAATTTGGGGAGTAATTGCAATAGTTGCATTTTGCTATTCCTTGAAGGTTGAAAAATACAAAAAGAAGTTTGATATCCAAACATATAAAGAAATTCTTGCTTTTATGGAGGGAAAGAATATGGATGAGCCTCAAAAAAATCAAGAGTATGGAAAACGACCATATCAGAAAATTTTCTTAGCAGTAGGCGCTGGGACATTGGCAGTTGTAGTAGCCGTAATTATGGCTATTATTATAAAACTTTAA
PROTEIN sequence
Length: 193
MKIGKQIRKYRTEMELSQDELAEKIFVSRQTISNWENNKNYPDVKSLLLLSSLFSVSLDRLVKGDLEEMKEKIKSEDIKEFNHLSSIFAVLLLATILLPVPLVHFFGKIGMGIWGVIAIVAFCYSLKVEKYKKKFDIQTYKEILAFMEGKNMDEPQKNQEYGKRPYQKIFLAVGAGTLAVVVAVIMAIIIKL*