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NECEvent2014_5_1_scaffold_229

Alias: 175_007_scaffold_229

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_1_scaffold_229_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28..540
DNA (513bp) protein (171aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BM23_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS79091.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
NECEvent2014_5_1_scaffold_229_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

528..1130
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TS99_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS79126.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
NECEvent2014_5_1_scaffold_229_3
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1173..1757
DNA (585bp) protein (195aa)
Maltose O-acetyltransferase n=1 Tax=Clostridium sp. ASF502 RepID=N1ZVL1_9CLOT rbh
Maltose O-acetyltransferase {ECO:0000313|EMBL:EMZ21042.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
sugar O-acetyltransferase
NECEvent2014_5_1_scaffold_229_4
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1829..2329
DNA (501bp) protein (167aa)
Uncharacterized protein conserved in bacteria C-term(DUF2220) n=1 Tax=Roseburia sp. CAG:100 RepID=R7QZZ3_9FIRM
Uncharacterized protein conserved in bacteria C-term(DUF2220) {ECO:0000313|EMBL:CDF44327.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environ
valyl-tRNA synthetase
NECEvent2014_5_1_scaffold_229_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2911..3636
DNA (726bp) protein (242aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Bacteriophage endolysin (N-acetylmuramoyl-L-alanine amidase) {ECO:0000313|EMBL:CDH89537.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CDH89537.1};; N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ACD23917.1}
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Clostridium botulinum B RepID=B2TKL3_CLOBB
NECEvent2014_5_1_scaffold_229_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4015..4854
DNA (840bp) protein (280aa)
Transcription antiterminator LicT n=6 Tax=Clostridium difficile RepID=D5Q863_CLODI rbh
Transcription antiterminator, PTS operon regulator {ECO:0000313|EMBL:CCK88443.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou
bglG1; transcription antiterminator
NECEvent2014_5_1_scaffold_229_7
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5007..6905
DNA (1899bp) protein (633aa)
PTS system, beta-glucoside-specific IIABC component n=1 Tax=Clostridium colicanis 209318 RepID=N9WHG0_9CLOT rbh
PTS system, beta-glucoside-specific IIABC component {ECO:0000313|EMBL:ENZ02521.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
PTS system, beta-glucoside-specific IIABC subunit
NECEvent2014_5_1_scaffold_229_8
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6966..8381
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WHY3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ02520.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
6-phospho-beta-glucosidase
NECEvent2014_5_1_scaffold_229_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8781..9212
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UXC6_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES49844.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
hypothetical protein
NECEvent2014_5_1_scaffold_229_10
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9619..10779
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXJ5_CLOA9 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS77502.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604
NECEvent2014_5_1_scaffold_229_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10934..11368
DNA (435bp) protein (145aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3L2_CLOPF
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDT71651.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_5_1_scaffold_229_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11462..12343
DNA (882bp) protein (294aa)
Pirin family protein n=2 Tax=Clostridium perfringens RepID=H7CTP3_CLOPF rbh
pirin
Pirin family protein {ECO:0000313|EMBL:EIA18045.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_1_scaffold_229_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12387..12983
DNA (597bp) protein (199aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound o
FMN-dependent NADH-azoreductase n=1 Tax=Clostridium colicanis 209318 RepID=N9WB73_9CLOT rbh
flavodoxin family protein
NECEvent2014_5_1_scaffold_229_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13165..13338)
DNA (174bp) protein (58aa)
Transcription regulator, Cro/CI family-related protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q166_CLONN
helix-turn-helix family protein
XRE family transcriptional regulator {ECO:0000313|EMBL:KJU72218.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_5_1_scaffold_229_15
unknown

Not on your lists

comp(13377..13535)
DNA (159bp) protein (53aa)

This feature has no annotations

NECEvent2014_5_1_scaffold_229_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13657..14577
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P51 RepID=T4S2M0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE69702.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
hypothetical protein
NECEvent2014_5_1_scaffold_229_17
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14816..15730
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7GA11_9FIRM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67494.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_5_1_scaffold_229_18
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15861..16439
DNA (579bp) protein (193aa)
DNA-binding protein n=1 Tax=Clostridium intestinale URNW RepID=U2N3T2_9CLOT
DNA-binding protein {ECO:0000313|EMBL:CEN71961.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
DNA-binding protein
NECEvent2014_5_1_scaffold_229_19
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16603..16890
DNA (288bp) protein (96aa)
Transcriptional regulator n=1 Tax=Clostridium intestinale URNW RepID=U2PR51_9CLOT
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:AAK81256.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutyli
NECEvent2014_5_1_scaffold_229_20
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16892..17338
DNA (447bp) protein (149aa)
Membrane protein n=1 Tax=Clostridium intestinale URNW RepID=U2PR56_9CLOT
Membrane protein {ECO:0000313|EMBL:ERK28920.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
membrane protein
NECEvent2014_5_1_scaffold_229_21
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17354..17560
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DBY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI93843.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
NECEvent2014_5_1_scaffold_229_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17664..18029
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QY51_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52348.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_5_1_scaffold_229_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18035..18439
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z635_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86836.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
protein-tyrosine phosphatase
NECEvent2014_5_1_scaffold_229_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18850..19287)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V3J9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES49741.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
NECEvent2014_5_1_scaffold_229_25
unknown

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comp(19304..19384)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 25 items

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