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NECEvent2014_5_1_scaffold_173

Alias: 175_007_scaffold_173

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_1_scaffold_173_1
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..983)
DNA (981bp) protein (327aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EFH93811.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFH93811.1};; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphil
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6V7_FINMA rbh
RNA methyltransferase
NECEvent2014_5_1_scaffold_173_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1166..1321
DNA (156bp) protein (52aa)
MarR family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DCY8_CLODI
MarR family protein {ECO:0000313|EMBL:EQF24291.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
MarR family transcriptional regulator
NECEvent2014_5_1_scaffold_173_3
unknown

Not on your lists

1339..1626
DNA (288bp) protein (96aa)

This feature has no annotations

NECEvent2014_5_1_scaffold_173_4
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1610..2467
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HSN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE42405.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_5_1_scaffold_173_5
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2507..4303)
DNA (1797bp) protein (599aa)
ABC transporter, ATP-binding protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6V8_FINMA rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFH93812.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC
multidrug ABC transporter
NECEvent2014_5_1_scaffold_173_6
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4296..6047)
DNA (1752bp) protein (584aa)
ABC transporter, ATP-binding protein n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PP06_FINMA rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK94810.1}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ACS-
multidrug ABC transporter
NECEvent2014_5_1_scaffold_173_7
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6031..6507)
DNA (477bp) protein (159aa)
Transcriptional regulator, MarR family n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6W0_FINMA rbh
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFH93814.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna AT
MarR family transcriptional regulator
NECEvent2014_5_1_scaffold_173_8
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6677..7978)
DNA (1302bp) protein (434aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiam
Phosphomethylpyrimidine synthase n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6W2_FINMA rbh
thiamine biosynthesis protein ThiC
NECEvent2014_5_1_scaffold_173_9
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8159..9073)
DNA (915bp) protein (305aa)
Molybdenum cofactor biosynthesis protein C n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PP09_FINMA rbh
Molybdenum cofactor biosynthesis protein C {ECO:0000313|EMBL:EFK94724.1}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magn
molybdenum cofactor biosynthesis protein MoaC/MOSC-domain-containing protein
NECEvent2014_5_1_scaffold_173_10
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9075..10022)
DNA (948bp) protein (316aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphi
Molybdenum cofactor biosynthesis protein A n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PP10_FINMA rbh
molybdenum cofactor biosynthesis protein A
NECEvent2014_5_1_scaffold_173_11
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10110..11285)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PP11_FINMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EFK94733.1}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ACS-171-V-Col3.;"
hypothetical protein
NECEvent2014_5_1_scaffold_173_12
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11301..11582)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6W6_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFH93820.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
hypothetical protein
NECEvent2014_5_1_scaffold_173_13
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11940..12701)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6W7_FINMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EFH93821.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
hypothetical protein
NECEvent2014_5_1_scaffold_173_14
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12836..14092
DNA (1257bp) protein (419aa)
Branched-chain amino acid transport protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KVX9_FINMA rbh
Membrane protein {ECO:0000313|EMBL:EXF27914.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
hypothetical protein
NECEvent2014_5_1_scaffold_173_15
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14487..15845
DNA (1359bp) protein (453aa)
Transporter gate domain protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6W9_FINMA rbh
Transporter gate domain protein {ECO:0000313|EMBL:EFH93823.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 5351
hypothetical protein
NECEvent2014_5_1_scaffold_173_16
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15885..16538)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S3B4_FINM2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAG08854.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 2932
NECEvent2014_5_1_scaffold_173_17
unknown

Not on your lists

comp(16528..16629)
DNA (102bp) protein (34aa)

This feature has no annotations

NECEvent2014_5_1_scaffold_173_18
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16871..16996)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KXD2_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFL54273.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
hypothetical protein
NECEvent2014_5_1_scaffold_173_19
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17175..17399
DNA (225bp) protein (75aa)
DNA-binding helix-turn-helix protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6Y3_FINMA
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFH93837.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC
putative transcriptional regulator
NECEvent2014_5_1_scaffold_173_20
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17439..17579
DNA (141bp) protein (47aa)
DNA-binding helix-turn-helix protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6Y3_FINMA
putative transcriptional regulator
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EGS34383.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY40
NECEvent2014_5_1_scaffold_173_21
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17582..18124
DNA (543bp) protein (181aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6Y4_FINMA rbh
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EFH93838.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldi
putative phage-like protein
NECEvent2014_5_1_scaffold_173_22
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18135..19553
DNA (1419bp) protein (473aa)
DNA-damage repair protein n=2 Tax=Finegoldia magna RepID=B0S076_FINM2 rbh
DNA-damage repair protein
DNA-damage repair protein {ECO:0000313|EMBL:BAG07639.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 29
NECEvent2014_5_1_scaffold_173_23
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19534..19878
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6Y6_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFH93840.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
hypothetical protein
NECEvent2014_5_1_scaffold_173_24
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19881..20180
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6Y7_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFH93841.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
hypothetical protein
NECEvent2014_5_1_scaffold_173_25
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20554..21090
DNA (537bp) protein (179aa)
Pyruvate/ferredoxin oxidoreductase gamma subunit n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S026_FINM2 rbh
pyruvate/ferredoxin oxidoreductase subunit gamma
Pyruvate/ferredoxin oxidoreductase gamma subunit {ECO:0000313|EMBL:BAG07636.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldi
NECEvent2014_5_1_scaffold_173_26
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21071..21364
DNA (294bp) protein (98aa)
Putative 2-ketoisovalerate ferredoxin oxidoreductase subunit delta n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N009_FINMA
Pyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:EXF27750.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.
2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family
NECEvent2014_5_1_scaffold_173_27
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21361..22506
DNA (1146bp) protein (382aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KZC5_FINMA rbh
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein {ECO:0000313|EMBL:EFL53588.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilacea
pyruvate/ferredoxin oxidoreductase subunit alpha
NECEvent2014_5_1_scaffold_173_28
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22499..23392
DNA (894bp) protein (298aa)
Pyruvate/ferredoxin oxidoreductase beta subunit n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S024_FINM2 rbh
pyruvate/ferredoxin oxidoreductase subunit beta
Pyruvate/ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:BAG07634.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia
NECEvent2014_5_1_scaffold_173_29
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23385..24740
DNA (1356bp) protein (452aa)
Coenzyme F390 synthetase n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S021_FINM2 rbh
Coenzyme F390 synthetase {ECO:0000313|EMBL:EXF27747.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
coenzyme F390 synthetase
NECEvent2014_5_1_scaffold_173_30
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24742..25410
DNA (669bp) protein (223aa)
Putative aminotransferase n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S020_FINM2 rbh
putative aminotransferase
Putative aminotransferase {ECO:0000313|EMBL:BAG07632.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 29
Displaying 30 items

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