ggKbase home page

NECEvent2014_5_1_scaffold_256

Alias: 175_007_scaffold_256

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_1_scaffold_256_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..411)
DNA (411bp) protein (137aa)
Transcription elongation factor GreA n=53 Tax=Staphylococcus epidermidis RepID=GREA_STAEQ
Transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000255|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000255|HAMAP-Rule:MF_00105}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillal
NECEvent2014_5_1_scaffold_256_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(442..1065)
DNA (624bp) protein (208aa)
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|
Uridine kinase n=51 Tax=Staphylococcus epidermidis RepID=URK_STAEQ rbh
NECEvent2014_5_1_scaffold_256_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1065..2333)
DNA (1269bp) protein (423aa)
Peptidase, U32 family {ECO:0000313|EMBL:EFE59832.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFE59832.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcu
Peptidase, U32 family n=48 Tax=Staphylococcus epidermidis RepID=Q5HNT8_STAEQ rbh
U32 family peptidase
NECEvent2014_5_1_scaffold_256_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2351..3274)
DNA (924bp) protein (308aa)
Peptidase, U32 family n=58 Tax=Staphylococcus epidermidis RepID=Q5HNT7_STAEQ rbh
peptidase, U32 family small subunit [C1]
U32 family peptidase {ECO:0000313|EMBL:ETJ09809.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_5_1_scaffold_256_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3277..3912)
DNA (636bp) protein (212aa)
O-methyltransferase family protein n=57 Tax=Staphylococcus epidermidis RepID=Q5HNT6_STAEQ rbh
methyltransferase small domain protein
O-methyltransferase {ECO:0000313|EMBL:EFE59830.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_1_scaffold_256_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4341..4649)
DNA (309bp) protein (103aa)
UPF0473 protein SERP1179 n=78 Tax=Staphylococcus epidermidis RepID=Y1179_STAEQ
hypothetical protein
UPF0473 protein HMPREF0794_0387 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey)
NECEvent2014_5_1_scaffold_256_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4664..5092)
DNA (429bp) protein (143aa)
Putative Holliday junction resolvase (EC:3.1.-.-)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=525375 specie
Putative Holliday junction resolvase n=52 Tax=Staphylococcus epidermidis RepID=RUVX_STAEQ
NECEvent2014_5_1_scaffold_256_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5094..5354)
DNA (261bp) protein (87aa)
UPF0297 protein SERP1181 n=80 Tax=Staphylococcus epidermidis RepID=Y1181_STAEQ
hypothetical protein
UPF0297 protein SERP1181 {ECO:0000255|HAMAP-Rule:MF_01507}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / R
NECEvent2014_5_1_scaffold_256_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(5418..8048)
DNA (2631bp) protein (877aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_
Alanine--tRNA ligase n=22 Tax=Staphylococcus epidermidis RepID=SYA_STAEQ rbh
NECEvent2014_5_1_scaffold_256_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8377..10809)
DNA (2433bp) protein (811aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.
Helicase, RecD/TraA family n=31 Tax=Staphylococcus epidermidis RepID=D4FIJ5_STAEP rbh
RecD-like DNA helicase YrrC
NECEvent2014_5_1_scaffold_256_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10811..11479)
DNA (669bp) protein (223aa)
TPR domain protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HNT0_STAEQ rbh
Tetratricopeptide repeat (TPR) family protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFE59824.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_1_scaffold_256_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11642..12760)
DNA (1119bp) protein (373aa)
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;"
tRNA-specific 2-thiouridylase MnmA n=3 Tax=Staphylococcus epidermidis RepID=J0E2C2_STAEP rbh
NECEvent2014_5_1_scaffold_256_13
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12760..13902)
DNA (1143bp) protein (381aa)
Putative cysteine desulfurase n=3 Tax=Staphylococcus epidermidis RepID=F3SZQ5_STAEP rbh
aminotransferase class-V family protein rbh
Cysteine desulfurase {ECO:0000313|EMBL:ETJ13666.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_5_1_scaffold_256_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14145..15140
DNA (996bp) protein (332aa)
Bacterial luciferase family protein n=41 Tax=Staphylococcus epidermidis RepID=Q5HNS7_STAEQ rbh
luciferase oxidoreductase, group 1 family protein rbh
Bacterial luciferase family protein {ECO:0000313|EMBL:AAW54560.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35
NECEvent2014_5_1_scaffold_256_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15340..15483)
DNA (144bp) protein (48aa)
Uncharacterized protein n=48 Tax=Staphylococcus epidermidis RepID=Q5HNS6_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54561.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_5_1_scaffold_256_16
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15669..16091)
DNA (423bp) protein (141aa)
Rrf2 family protein n=53 Tax=Staphylococcus epidermidis RepID=Q5HNS5_STAEQ
Rrf2 family protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ13479.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_5_1_scaffold_256_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16177..17154
DNA (978bp) protein (326aa)
Recombination factor protein RarA n=1 Tax=Staphylococcus epidermidis VCU144 RepID=F3SZQ9_STAEP rbh
recombination factor protein RarA
ATPase, AAA family {ECO:0000313|EMBL:EFE59818.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying 17 items

View Taxonomy