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NECEvent2014_5_1_scaffold_416

Alias: 175_007_scaffold_416

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_1_scaffold_416_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3..935
DNA (933bp) protein (311aa)
HPr kinase/phosphorylase (EC:2.7.1.-)
HPr kinase/phosphorylase {ECO:0000255|HAMAP-Rule:MF_01249}; Short=HPrK/P {ECO:0000255|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000255|HAMAP-Rule:MF_01249};; EC=2.7.4.- {ECO:0000255|HAMAP-Rule:MF_01249
HPr kinase/phosphorylase n=49 Tax=Staphylococcus epidermidis RepID=HPRK_STAEQ rbh
NECEvent2014_5_1_scaffold_416_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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941..1780
DNA (840bp) protein (280aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase {ECO:0000255|HAMAP-Rule:MF_01147}; EC=2.4.99.- {ECO:0000255|HAMAP-Rule:MF_01147};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphyloco
Prolipoprotein diacylglyceryl transferase n=30 Tax=Staphylococcus epidermidis RepID=LGT_STAEQ rbh
NECEvent2014_5_1_scaffold_416_3

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1777..2313
DNA (537bp) protein (179aa)
O-acetyltransferase n=19 Tax=Staphylococcus epidermidis RepID=Q8CTE5_STAES rbh
O-acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ETJ18266.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_1_scaffold_416_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2280..3719
DNA (1440bp) protein (480aa)
Tetratricopeptide repeat protein n=3 Tax=Staphylococcus epidermidis RepID=F3TQ42_STAEP rbh
hypothetical protein
YvcD protein {ECO:0000313|EMBL:AAW53853.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_5_1_scaffold_416_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3784..4716
DNA (933bp) protein (311aa)
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase; Short=TRXR;; EC=1.8.1.9;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Thioredoxin reductase n=51 Tax=Staphylococcus epidermidis RepID=TRXB_STAEQ rbh
NECEvent2014_5_1_scaffold_416_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4892..5800
DNA (909bp) protein (303aa)
UPF0042 nucleotide-binding protein SE_0548 n=35 Tax=Staphylococcus epidermidis RepID=Y548_STAES rbh
Hypothetical ATP-binding protein UPF0042,contains P-loop
Nucleotide-binding protein SE_0548 {ECO:0000255|HAMAP-Rule:MF_00636}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC
NECEvent2014_5_1_scaffold_416_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5800..6795
DNA (996bp) protein (332aa)
Gluconeogenesis factor n=49 Tax=Staphylococcus epidermidis RepID=Q8CTE2_STAES rbh
Hypothetical protein UPF0052
Gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_1_scaffold_416_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6924..7868
DNA (945bp) protein (315aa)
Putative sporulation transcription regulator WhiA n=48 Tax=Staphylococcus epidermidis RepID=WHIA_STAEQ rbh
Cytoplasmic hypothetical protein DUF199
Putative sporulation transcription regulator WhiA {ECO:0000255|HAMAP-Rule:MF_01420}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermid
NECEvent2014_5_1_scaffold_416_trna_1
unknown

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comp(7936..8007)
DNA (72bp)
transferRNA
NECEvent2014_5_1_scaffold_416_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8196..8780
DNA (585bp) protein (195aa)
clpP; ATP-dependent Clp endopeptidase, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000255|HAMAP-Rule:MF_00444}; EC=3.4.21.92 {ECO:0000255|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000255|HAMAP-Rule:MF_00444}; TaxID=176280 spe
ATP-dependent Clp protease proteolytic subunit n=81 Tax=Staphylococcus epidermidis RepID=CLPP_STAEQ rbh
NECEvent2014_5_1_scaffold_416_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9042..9233)
DNA (192bp) protein (64aa)
Uncharacterized protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HQV9_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53868.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_5_1_scaffold_416_11
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9264..10163)
DNA (900bp) protein (300aa)
Epimerase family protein SERP0438 n=51 Tax=Staphylococcus epidermidis RepID=Y438_STAEQ rbh
hypothetical protein
Epimerase family protein {ECO:0000313|EMBL:ETJ12315.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Displaying 12 items

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