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NECEvent2014_5_1_scaffold_1086

Alias: 175_007_scaffold_1086

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_1_scaffold_1086_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..400
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=68 Tax=Staphylococcus epidermidis RepID=RS11_STAEQ
SSU ribosomal protein S11p (S14e)
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;
NECEvent2014_5_1_scaffold_1086_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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477..1421
DNA (945bp) protein (315aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=76 Tax=Staphylococcus epidermidis RepID=RPOA_STAEQ rbh
NECEvent2014_5_1_scaffold_1086_3

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1438..1806
DNA (369bp) protein (123aa)
50S ribosomal protein L17 n=64 Tax=Staphylococcus epidermidis RepID=RL17_STAEQ
LSU ribosomal protein L17p
50S ribosomal protein L17 {ECO:0000313|EMBL:ETJ21637.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_1_scaffold_1086_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2101..2946
DNA (846bp) protein (282aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
ABC transporter, ATP-binding protein n=1 Tax=Staphylococcus epidermidis M23864:W2(grey) RepID=D4FP79_STAEP rbh
ATPase component of general energizing module of ECF transporters
NECEvent2014_5_1_scaffold_1086_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2943..3803
DNA (861bp) protein (287aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
Cobalt ATP-binding cassette C-terminal domain protein n=12 Tax=Staphylococcus epidermidis RepID=H3V2M7_STAEP rbh
ABC transporter family protein
NECEvent2014_5_1_scaffold_1086_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3793..4059
DNA (267bp) protein (89aa)
Energy-coupling factor transporter transmembrane protein EcfT n=22 Tax=Staphylococcus epidermidis RepID=Q5HM29_STAEQ
cobalt transport family protein
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=176279 species="Bacter
Displaying 6 items

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