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NECEvent2014_5_1_scaffold_564_10

Organism: NECEvent2014_5_1_Staphylococcus_epidermidis_33_6

near complete RP 46 / 55 MC: 4 BSCG 45 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 3646..4182

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=79 Tax=Staphylococcus epidermidis RepID=RL6_STAEQ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 353
  • Evalue 1.10e-94
  • rbh
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 353
  • Evalue 3.00e-95
50S ribosomal protein L6 {ECO:0000313|EMBL:ETJ21625.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 353
  • Evalue 1.50e-94

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Taxonomy

human gut metagenome

Sequences

DNA sequence
Length: 537
ATGAGTCGTGTTGGTAAGAAAATTATTGACATTCCTAGTGACGTAACAGTAACTTTTGACGGAAGTCATGTCACTGTAAAAGGTCCAAAAGGTGAATTAGAAAGAACTTTAAATGAAAGAATGACATTTAAACAAGAAGAAAACACTGTTGAAGTTGTAAGACCATCTGATTCTAAAGAAGACAGAACAGATCATGGTACAACTCGTGCTTTATTAAATAATATGGTACTAGGTGTTTCTCAAGGTTACGAAAAAACACTTGAGCTTGTTGGTGTAGGTTACCGTGCACAAATGCAAGGTAAAGATTTAGTACTTAATGTTGGATACTCTCACCCAGTTGAAATTAAAGCAGAAGAAGGCATTACTTTTGCTGTTGAGAAAAATACAACTGTTAAAGTATCTGGTGTTTCTAAAGAACAAGTTGGTGCGATTGCTTCTAACATTCGTTCTGTAAGACCTCCAGAACCTTATAAAGGTAAAGGTATTCGCTACCAAGGTGAATATGTACGCCGTAAAGAAGGTAAAACTGGTAAATAA
PROTEIN sequence
Length: 179
MSRVGKKIIDIPSDVTVTFDGSHVTVKGPKGELERTLNERMTFKQEENTVEVVRPSDSKEDRTDHGTTRALLNNMVLGVSQGYEKTLELVGVGYRAQMQGKDLVLNVGYSHPVEIKAEEGITFAVEKNTTVKVSGVSKEQVGAIASNIRSVRPPEPYKGKGIRYQGEYVRRKEGKTGK*