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NECEvent2014_5_1_scaffold_564

Alias: 175_007_scaffold_564

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_1_scaffold_564_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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84..737
DNA (654bp) protein (218aa)
30S ribosomal protein S3 n=81 Tax=Staphylococcus epidermidis RepID=RS3_STAEQ rbh
SSU ribosomal protein S3p (S3e)
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / R
NECEvent2014_5_1_scaffold_564_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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740..1174
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=77 Tax=Staphylococcus epidermidis RepID=RL16_STAEQ
LSU ribosomal protein L16p (L10e)
50S ribosomal protein L16 {ECO:0000255|HAMAP-Rule:MF_01342}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;
NECEvent2014_5_1_scaffold_564_3
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1164..1373
DNA (210bp) protein (70aa)
50S ribosomal protein L29, partial n=1 Tax=Staphylococcus sp. MDS7B RepID=UPI00035D4F81
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1406863 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus Z172.;"
NECEvent2014_5_1_scaffold_564_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


1398..1661
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=43 Tax=Staphylococcus RepID=RS17_STAEQ
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus ep
SSU ribosomal protein S17p (S11e)
NECEvent2014_5_1_scaffold_564_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1692..2060
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=81 Tax=Staphylococcus epidermidis RepID=RL14_STAEQ
LSU ribosomal protein L14p (L23e)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus e
NECEvent2014_5_1_scaffold_564_6

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2102..2419
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=20 Tax=Staphylococcus epidermidis RepID=C5QCL5_STAEP
50S ribosomal protein L24 {ECO:0000313|EMBL:ETJ21621.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rplX; 50S ribosomal protein L24
NECEvent2014_5_1_scaffold_564_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


2445..2984
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=71 Tax=Staphylococcus epidermidis RepID=RL5_STAEQ rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epi
LSU ribosomal protein L5p (L11e)
NECEvent2014_5_1_scaffold_564_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


3022..3192
DNA (171bp) protein (57aa)
30S ribosomal protein S14 type Z n=78 Tax=Staphylococcus RepID=RS14Z_STAEQ
rpsN1; 30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000255|HAMAP-Rule:MF_01364}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 3
NECEvent2014_5_1_scaffold_564_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


3223..3621
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=80 Tax=Staphylococcus epidermidis RepID=RS8_STAEQ
SSU ribosomal protein S8p (S15Ae)
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
NECEvent2014_5_1_scaffold_564_10

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3646..4182
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=79 Tax=Staphylococcus epidermidis RepID=RL6_STAEQ rbh
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000313|EMBL:ETJ21625.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_1_scaffold_564_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


4214..4576
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=53 Tax=Staphylococcus epidermidis RepID=RL18_STAEQ
LSU ribosomal protein L18p (L5e)
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
NECEvent2014_5_1_scaffold_564_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


4596..5096
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=77 Tax=Staphylococcus epidermidis RepID=RS5_STAEQ rbh
SSU ribosomal protein S5p (S2e)
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epi
NECEvent2014_5_1_scaffold_564_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


5113..5295
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=37 Tax=Staphylococcus epidermidis RepID=RL30_STAEQ
rpmD; ribosomal protein L30
50S ribosomal protein L30 {ECO:0000255|HAMAP-Rule:MF_01371}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 /
NECEvent2014_5_1_scaffold_564_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


5312..5752
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=70 Tax=Staphylococcus RepID=RL15_STAES
rplO; ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus ep
NECEvent2014_5_1_scaffold_564_15

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5752..7044
DNA (1293bp) protein (431aa)
Protein translocase subunit SecY n=51 Tax=Staphylococcus epidermidis RepID=SECY_STAEQ rbh
Preprotein translocase secY subunit (TC 3.A.5.1.1)
Protein translocase subunit SecY {ECO:0000313|EMBL:ETJ21630.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_1_scaffold_564_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7062..7667
DNA (606bp) protein (202aa)
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00
Adenylate kinase n=24 Tax=Staphylococcus epidermidis RepID=C5R0P9_STAEP rbh
Displaying 16 items

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