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NECEvent2014_5_1_scaffold_393

Alias: 175_007_scaffold_393

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_1_scaffold_393_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..162
DNA (162bp) protein (54aa)
UPI0003D5AFC5 related cluster n=1 Tax=unknown RepID=UPI0003D5AFC5
Uncharacterized protein {ECO:0000313|EMBL:KGF12455.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_1_scaffold_393_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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797..2134
DNA (1338bp) protein (446aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veill
UPI0003D5D674 related cluster n=1 Tax=unknown RepID=UPI0003D5D674
hypothetical protein
NECEvent2014_5_1_scaffold_393_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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2183..4963
DNA (2781bp) protein (927aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
UPI0003D5D674 related cluster n=1 Tax=unknown RepID=UPI0003D5D674 rbh
CRISPR-associated protein cas9/csn1, subtype II/nmemi
NECEvent2014_5_1_scaffold_393_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4960..5844
DNA (885bp) protein (295aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veill
UPI0003D5E1A5 related cluster n=1 Tax=unknown RepID=UPI0003D5E1A5 rbh
cas1; CRISPR-associated Cas1
NECEvent2014_5_1_scaffold_393_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5861..6154
DNA (294bp) protein (98aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; V
UPI0003D59BA5 related cluster n=1 Tax=unknown RepID=UPI0003D59BA5
CRISPR-associated protein Cas2
NECEvent2014_5_1_scaffold_393_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6151..6816
DNA (666bp) protein (222aa)
UPI0003D67FF4 related cluster n=1 Tax=unknown RepID=UPI0003D67FF4 rbh
CRISPR-associated protein Csn2
Uncharacterized protein {ECO:0000313|EMBL:ETI89524.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_1_scaffold_393_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7449..8543
DNA (1095bp) protein (365aa)
UPI0003D68175 related cluster n=1 Tax=unknown RepID=UPI0003D68175 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI84874.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
monogalactosyldiacylglycerol synthase
NECEvent2014_5_1_scaffold_393_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8574..9203)
DNA (630bp) protein (210aa)
UPI0003D668F7 related cluster n=1 Tax=unknown RepID=UPI0003D668F7 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETI84873.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_1_scaffold_393_trna_1
unknown

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9342..9422
DNA (81bp)
transferRNA
NECEvent2014_5_1_scaffold_393_9
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9541..10014
DNA (474bp) protein (158aa)
UPI0003D5BD11 related cluster n=1 Tax=unknown RepID=UPI0003D5BD11 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12449.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
beta-D-galactosidase
NECEvent2014_5_1_scaffold_393_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10136..10693
DNA (558bp) protein (186aa)
UPI0003D61799 related cluster n=1 Tax=unknown RepID=UPI0003D61799 rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ETI84871.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativico
transcriptional regulator
NECEvent2014_5_1_scaffold_393_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10702..11196
DNA (495bp) protein (165aa)
UPI0003D69469 related cluster n=1 Tax=unknown RepID=UPI0003D69469
Uncharacterized protein {ECO:0000313|EMBL:ETI84870.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
efflux transporter
Displaying 12 items

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