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NECEvent2014_5_2_scaffold_158

Alias: 175_001_scaffold_158

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_158_1
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1..1038
DNA (1038bp) protein (346aa)
UPI0003D66436 related cluster n=1 Tax=unknown RepID=UPI0003D66436 rbh
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:ETJ15625.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillone
aldehyde dehydrogenase
NECEvent2014_5_2_scaffold_158_2
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1083..3020)
DNA (1938bp) protein (646aa)
UPI0003D68C67 related cluster n=1 Tax=unknown RepID=UPI0003D68C67 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ15626.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_
hypothetical protein
NECEvent2014_5_2_scaffold_158_3
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3028..3333)
DNA (306bp) protein (102aa)
UPI0003D65223 related cluster n=1 Tax=unknown RepID=UPI0003D65223
Uncharacterized protein {ECO:0000313|EMBL:ETJ15627.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_
hypothetical protein
NECEvent2014_5_2_scaffold_158_4
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3378..4496)
DNA (1119bp) protein (373aa)
UPI0003D679A9 related cluster n=1 Tax=unknown RepID=UPI0003D679A9 rbh
Cell division protein FtsA {ECO:0000313|EMBL:ETJ15628.1}; Flags: Fragment;; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillon
MreB/Mrl family cell shape determining protein
NECEvent2014_5_2_scaffold_158_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4483..5733)
DNA (1251bp) protein (417aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UPI0003D67517 related cluster n=1 Tax=unknown RepID=UPI0003D67517 rbh
NECEvent2014_5_2_scaffold_158_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5875..6240)
DNA (366bp) protein (122aa)
UPI0003D5A947 related cluster n=1 Tax=unknown RepID=UPI0003D5A947
Uncharacterized protein {ECO:0000313|EMBL:ETI87330.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_2_scaffold_158_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6566..8113
DNA (1548bp) protein (516aa)
UPI0003D5C8FA related cluster n=1 Tax=unknown RepID=UPI0003D5C8FA rbh
Aminobenzoyl-glutamate transporter {ECO:0000313|EMBL:KGF12030.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridial
hypothetical protein
NECEvent2014_5_2_scaffold_158_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8141..9400
DNA (1260bp) protein (420aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1403945 spec
UPI0003D68FB1 related cluster n=1 Tax=unknown RepID=UPI0003D68FB1 rbh
peptidase T
NECEvent2014_5_2_scaffold_158_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9451..10173)
DNA (723bp) protein (241aa)
UPI0003D6308E related cluster n=1 Tax=unknown RepID=UPI0003D6308E rbh
Membrane family protein {ECO:0000313|EMBL:ETI87327.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_2_scaffold_158_10
unknown

Not on your lists

comp(10197..10346)
DNA (150bp) protein (50aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_158_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10414..11037
DNA (624bp) protein (208aa)
UPI0003D5D62B related cluster n=1 Tax=unknown RepID=UPI0003D5D62B rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI87326.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_2_scaffold_158_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11286..11714
DNA (429bp) protein (143aa)
UPI0003D5C187 related cluster n=1 Tax=unknown RepID=UPI0003D5C187
Uncharacterized protein {ECO:0000313|EMBL:KGF12032.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
hypothetical protein
NECEvent2014_5_2_scaffold_158_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


11714..13375
DNA (1662bp) protein (554aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1403945 species="Bacteria; Fir
UPI0003D5DF14 related cluster n=1 Tax=unknown RepID=UPI0003D5DF14 rbh
arginyl-tRNA synthetase
NECEvent2014_5_2_scaffold_158_14
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13386..14990
DNA (1605bp) protein (535aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
UPI0003D5E16B related cluster n=1 Tax=unknown RepID=UPI0003D5E16B rbh
CTP synthase
NECEvent2014_5_2_scaffold_158_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15070..16194)
DNA (1125bp) protein (375aa)
UPI0003D67460 related cluster n=1 Tax=unknown RepID=UPI0003D67460 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI88107.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_2_scaffold_158_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16179..17297)
DNA (1119bp) protein (373aa)
hisC1; histidinol-phosphate aminotransferase 1 (EC:2.6.1.9)
UPI0003D5E126 related cluster n=1 Tax=unknown RepID=UPI0003D5E126 rbh
Aminotransferase, class I/II {ECO:0000313|EMBL:ETI88108.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succi
NECEvent2014_5_2_scaffold_158_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17384..18067)
DNA (684bp) protein (228aa)
UPI0003D657F3 related cluster n=1 Tax=unknown RepID=UPI0003D657F3 rbh
Cobalt transport protein {ECO:0000313|EMBL:ETI88109.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinici
cobalt transporter
NECEvent2014_5_2_scaffold_158_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18064..18795)
DNA (732bp) protein (244aa)
UPI0003D68E7F related cluster n=1 Tax=unknown RepID=UPI0003D68E7F rbh
Cobalt import ATP-binding protein CbiO 1 {ECO:0000313|EMBL:ETI88110.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativi
ABC transporter
NECEvent2014_5_2_scaffold_158_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18789..20186)
DNA (1398bp) protein (466aa)
UPI0003D5CDBC related cluster n=1 Tax=unknown RepID=UPI0003D5CDBC rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETI88111.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicocc
ABC transporter
NECEvent2014_5_2_scaffold_158_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20661..22040
DNA (1380bp) protein (460aa)
UPI0003D660C7 related cluster n=1 Tax=unknown RepID=UPI0003D660C7 rbh
Na+/solute symporter {ECO:0000313|EMBL:ETI88112.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivora
Na+/solute symporter
NECEvent2014_5_2_scaffold_158_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22120..22686
DNA (567bp) protein (189aa)
UPI0003D6867D related cluster n=1 Tax=unknown RepID=UPI0003D6867D rbh
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinici
ECF transporter, substrate-specific component
NECEvent2014_5_2_scaffold_158_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22716..23444)
DNA (729bp) protein (243aa)
UPI0003D5F6E7 related cluster n=1 Tax=unknown RepID=UPI0003D5F6E7 rbh
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" sour
Sec-independent protein translocase subunit TatC
NECEvent2014_5_2_scaffold_158_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23441..23641)
DNA (201bp) protein (67aa)
UPI0003D6613D related cluster n=1 Tax=unknown RepID=UPI0003D6613D
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" sour
sec-independent protein translocase protein tatA/E homolog
NECEvent2014_5_2_scaffold_158_24
unknown

Not on your lists

comp(23608..23832)
DNA (225bp) protein (75aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_158_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23870..25042
DNA (1173bp) protein (391aa)
UPI0003D606A0 related cluster n=1 Tax=unknown RepID=UPI0003D606A0 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI88116.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_2_scaffold_158_trna_1
unknown

Not on your lists

25113..25184
DNA (72bp)
transferRNA
NECEvent2014_5_2_scaffold_158_26
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25193..25693
DNA (501bp) protein (167aa)
UPI0003D5E620 related cluster n=1 Tax=unknown RepID=UPI0003D5E620
Uncharacterized protein {ECO:0000313|EMBL:ETI87348.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
Displaying 27 items

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