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NECEvent2014_5_2_scaffold_223

Alias: 175_001_scaffold_223

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_223_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2..1633)
DNA (1632bp) protein (544aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomona
UPI0003D6092F related cluster n=1 Tax=unknown RepID=UPI0003D6092F rbh
hydroxymethylbutenyl pyrophosphate reductase
NECEvent2014_5_2_scaffold_223_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1637..2224)
DNA (588bp) protein (196aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
UPI0003D64A3F related cluster n=1 Tax=unknown RepID=UPI0003D64A3F rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase
NECEvent2014_5_2_scaffold_223_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2221..2898)
DNA (678bp) protein (226aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
UPI0003D5C44C related cluster n=1 Tax=unknown RepID=UPI0003D5C44C rbh
Cytidylate kinase
NECEvent2014_5_2_scaffold_223_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2895..4139)
DNA (1245bp) protein (415aa)
UPI0003D66A47 related cluster n=1 Tax=unknown RepID=UPI0003D66A47 rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ETI84858.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Nega
hypothetical protein
NECEvent2014_5_2_scaffold_223_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4132..4860)
DNA (729bp) protein (243aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. I
UPI0003D5F3FC related cluster n=1 Tax=unknown RepID=UPI0003D5F3FC rbh
pseudouridine synthase
NECEvent2014_5_2_scaffold_223_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4832..5365)
DNA (534bp) protein (178aa)
UPI0003D60DD5 related cluster n=1 Tax=unknown RepID=UPI0003D60DD5 rbh
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativi
condensin subunit ScpB
NECEvent2014_5_2_scaffold_223_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5337..6056)
DNA (720bp) protein (240aa)
UPI0003D6930E related cluster n=1 Tax=unknown RepID=UPI0003D6930E rbh
ScpA/B protein {ECO:0000313|EMBL:ETI84861.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DOR
hypothetical protein
NECEvent2014_5_2_scaffold_223_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6164..6460)
DNA (297bp) protein (99aa)
UPI0003D68D78 related cluster n=1 Tax=unknown RepID=UPI0003D68D78
Uncharacterized protein {ECO:0000313|EMBL:KGF12439.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_2_scaffold_223_9
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6464..7906)
DNA (1443bp) protein (481aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
UPI0003D5A3A8 related cluster n=1 Tax=unknown RepID=UPI0003D5A3A8 rbh
aspartyl/glutamyl-tRNA amidotransferase subunit B
NECEvent2014_5_2_scaffold_223_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7906..9366)
DNA (1461bp) protein (487aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=140394
UPI0003D5BC3D related cluster n=1 Tax=unknown RepID=UPI0003D5BC3D rbh
glutamyl-tRNA(Gln) amidotransferase subunit alpha
NECEvent2014_5_2_scaffold_223_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9382..9666)
DNA (285bp) protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
UPI0003D6409C related cluster n=1 Tax=unknown RepID=UPI0003D6409C
aspartyl/glutamyl-tRNA amidotransferase subunit C
NECEvent2014_5_2_scaffold_223_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9728..11740)
DNA (2013bp) protein (671aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1230730 species="Bacteri
UPI0003D615E6 related cluster n=1 Tax=unknown RepID=UPI0003D615E6 rbh
NAD-dependent DNA ligase
NECEvent2014_5_2_scaffold_223_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11744..13945)
DNA (2202bp) protein (734aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus
UPI0003D5947A related cluster n=1 Tax=unknown RepID=UPI0003D5947A rbh
ATP-dependent DNA helicase PcrA
NECEvent2014_5_2_scaffold_223_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13985..14908)
DNA (924bp) protein (308aa)
UPI0003D5DB86 related cluster n=1 Tax=unknown RepID=UPI0003D5DB86 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI84868.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
DHHA2 domain-containing protein
NECEvent2014_5_2_scaffold_223_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15012..18134)
DNA (3123bp) protein (1041aa)
UPI0003D662A4 related cluster n=1 Tax=unknown RepID=UPI0003D662A4 rbh
RND efflux system, inner membrane transporter CmeB {ECO:0000313|EMBL:ETI84869.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source
ATP synthase F0
NECEvent2014_5_2_scaffold_223_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18145..19299)
DNA (1155bp) protein (385aa)
UPI0003D69469 related cluster n=1 Tax=unknown RepID=UPI0003D69469 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI84870.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
efflux transporter
Displaying 16 items

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